Gene detail

Detailed information of HS04397 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS04397	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	chr5	25638582	25647623	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS04397

ATGGCAGAGCGGCAACAGCCGAAACACGAAGGCCGGGTAAAGATCGGCCATTACATCCTCGGCGACACGCTGGGAGTGGGAACCTTCGGGAAAGTGAAGAGTTAAGTGACGCGTTGGTTTTCTGTGGCTTTCTTTGCGTGTGACGTATGAGTGTTTTCAGTTGGAGTAATTATAATGAGGCGTGACGCTCCACGCAGTCAGGACCGTTGGTCCGCGTTGCGTTCAAGGACGTCCGTGAAGCGCGCGGCGCACGAGCTTAACGTTAACTGACAATATGTCCGGCTAATGCGGCGCGTGTCACCGCACCGCTCGCGGTTGTCAGCCCGTTAAGAGCTCACCGAGTCGGGGGAACCTCAACGTGTCTCCCGTCACGTGTCTCGCGGGTTATTATCGCAGGTTTTCTTGCACTCTGCGTGACCTTGTGAGCTTTTAACTCCGGGCTCACTCAGCCGCTTGTAGTGCGCGCCAGTGGCGTGTCCAGACCTTTTTGACTGGGGTGGCCCAAGTGGGGAACTGACTTATGTAGGGGTGGCATGAAGTACGAGTGCACATCGGGGCGGGGGGCACGGAATAGCATTAATTTACCATTTTTGTCTCTACTATCCATATCTACTTTAATTACTTTATAGTGTCTTACATTCCTGTGTTTAAAGTTTAATTTAAAAGATAAACAGACCTACCAATCTCAACAGAGTGACACCATACAAATGTAATATAAAACTTCCATACTTTATTCTTTAACAACTTGTACAGTACTGTATATACAAAAGAAAATGCACATTCTCAGAGTAAGTGCCAACAAACTTAAAATAAAGTAATAATGCCAACAATATTGAAAACGGTCACAGTATAAAGTAAAGTGCCAATAAAATAAATACAATTAAAAACTGTCACAGTATAAAGTAAAGTGCCAACAAAAAaCAGCCCAGATACATTTAAAACAGTTGAATTCTCCTGTTCTTGTGTTGGCTTGCAAACAGTTTTATAAAGTCATCCATGTTCAATGCCTTAGCTCTTCTTGACTCAATGCTTAGCACACCTAAATGGCTTAGCCTGCTATCTACCATTGTTGTCCTCAAATGGTTTTTAATTAGCTTTAGAGCAGAAAAGCTCCGCTCACAGGCAGCACTGCTGACTGGAAGGGCTACAGCTATTTTGCACAGCCTGAAGAGCTCATGAAACACCTCTTGGTACGGTTCTAAAAACACAGTCAAGTCTAGAATGCTTGCCAACTCTCTTGCCCCACTCTCAGCCTTCCTTTTCAAAATTCTCCTAGCCTGGTGAAGCTCATGAGTAAGATCTTCTTGATCACAACCATACATTTCACCCAAGCCAAATACTTGGTTGTCTTGAAGGAATGTACTGCTTTTAGGGTTTAGGGCCTGTAAACCCTTCATTATTAAACAGTTAGGTTTTGAGAACCTTCTTTCCAATTCACCAATCATGGAGTCAAGGATGGGGTAGAGTAGTCTCTGTCTGAATGTATCTTTGTCATCATTACCCTTCCGCAGGCCTATAGTACATGTCACATAAGACCCACCAAGTTTGGAGCTAACTATTTGTGATCTCTTCTTCTCACTATTCTCAACAGCTATATTACACTGTTTGGCTGTCTCTACTATGTCATGCCACAGTTGATCACAAAATGTCTCAGTCCTGTACTCCTGAAGTGTATCGTGAAGTGACTCCACCATGTCTACTGCCATAGCTAAATCAACTGAGGGTGACTGTAGCAGGTCAGAAAGCAGCTTTGTGTTTCCGAACAGTTTTCGGAAGGTTGCAAGGAGGGATATGAATGTGAGGTCAATCTGTGCAAGCAAACCTCGAGCATCAGTGGATCTGTCTCTATGATTTTCTTCGCTTATATTTTGAAGGACACACAACACAGCTGGTAACCTATCCATGAAGTTCCTGCAAGCCAATGCTCTACATGCCCATCTTGTGTCACTAAGTTTTTGTAACTCCCTAGGCTGGCCCCCATACATCTCCTTTTGAACATCCAGCCATTTCTGGTGCACATAAGATCCTGACATGTACACATAGAGCTTCTCAAGCAGTGAGAAGAAGCAATCAGCCTCTGGAACTGACTTCACAGTGTCAACTAAGACCAGGTTCAGACAGTGCGCATTACAGTGGACATAAAgGCATGTTTAGCCTCTGTCTTAATTCTGGCTGCCACACCTGTGTGTTTGCCACTCATCACTGAGGCCCCATCATAACCTTGTCCAACAAGATTTTCTTTGTACTGAAGGCCATATCTTTCTAAACACTGGATGATCATTTCGCTGAGCCCCTTAGCATCTAGATGTTGGGCATGTTGGAAATCAAGAAAGCTTTCATGCACAGcccgttgtagtaatacctaactactaatgacagctgctccttcttttcAGATCTTTGGTTTCATCAGCAATGACAGAGAATACCACACTCTCCTTCACTTCCTTCACAATCTCATCACGCACCATACTTGCTAAGCACTGCAGAATTTCATTCTGTATGGTATTGCTTGTGTATTTTGCATTGCGTTGTCCCTTCATGGTTTGGGCTACCATAGGATTGTGTTTAGCGATCATTTCTAGAATTCCTAAGAAATTCCCTTTGTTGTCATATTCTTCCGATTCACGGTGACCTCTTTGTGCTATATTCTGTGTTGCTGTCAAAAGCAGTACATCTGCAACTGTTTTAATGTAACTGCGATTCTCTTCAACTTTCTTTTTGTACTCTTTGTTAATCATATCTAAGATAGAAGAATCTGTAAGCAATAGCCTCTTGTGCTCATTCCAAGCAAACATGGCATTAATGTGAGACTCAGATTTCTCATGCAACTTAAAGCCAGCATCTTTGTACGTTGCTTTTTCCCAGTGTGAAAAGCCTGATTCTGAGGAGAAAACAGATTCTGACgCCAGGCAGGGAGAAGTGTCTGCATGCGTAACAGTAGGCTGAATCTTTGCTTTGTGAGTATTCAAGCCAGGAATTGTGGTTAAACCACACTGGATTGAACGccTCCTCTTCTCACCTTGGAGGGTTCTTGGAAAAACCTTTAAACGAGGCTGAGAGGGACCTGCTGCTCTTGACTGTGAAATATCTGAAAGTGACAAAAGCATGAGAATTGGATCAGTGTCATGTACTTGTTGGGACAGAAGTGCTCATTGGGGCATTAGTACAGATGAAAGAATTGAATTAAGTACAATATATTTCATATGAAATATTAAGGCATACCATGAGGTCCAGGTGGGGCCACAAGGGCTGCTGCATCACCATCCCCACGTGTCACTGCATGGCCTGCAGGTACTGCTGGATGGTTCTCAGTGTCAGTGTCATTGTCAGAGAGTGGCTGACTTGACACACCTGAAGTAATATaGGATTTTAACAGTTGTATCAATTTATTTGTATGTCAAATTAGTCATATTTAGCTTTTTCACACCTGTATTGTTAAAAATAGGGCTTTGCCCTGAATCTCAGTATAAGCCACTATAAGTATAGCAAAAGTGAAACATCTCAAGTCATAGCAGATAGTTTTATAAAGATGCATACATTACATACCCTGATGTGCAAGTGAAGATGAAGGGCCTTCATCACCAGTATCCTTGTCTGAGTCTACaaaacacatacgttgtcatcagaatgataataaaatcagccttttGTAAGTAGGCTAAGTGGTATGTTACGCAACCcagatgactaaaatgaaataatgactattgcacttctacactaattgagaagttagtgtcaactttagtttcaatgtctggcaattaaccacaatgtcattgatattatcaaggcaatcaaataagtgcttactaaagagaaatctggaactatcaggattttacatacccatgtgtacagctgaagctggaggctcctgctgtacatccctagcagagtcaagctggctctcatcctcagactgactagcactgctggcttctgctgctctgtcctgctctgttgttttggatttctttcttttgaagaatccctgaatgttctgatttcttttcatactgtaatagtcgcatgtcatgatgcatgtcactatatcttgcacaatacatttagcctaattatgaatgcatgaatgaatgtgacatgcaaaacttactcaggtctaatgttacaaagttagaagagatacaagacagatttacatactgtaacgttaagttagctagcgttagcattagcattagcgttagcgttagcatCGTTgacaataaccaaacaatgatgacgacaggtttgctagtaagctgagtcaggaaataataaaataagatgggaaaacgttttagcttttaaaccattcacacatgtgtatcaataagtctactcacatctttcaggagctaagaatccctggacaggtttgctaggcagcaagctgagtcagtcgacactgttgacagtcgcgatgatgacagacctgcaccacatatcgtgaaaatcaaaaaacgttttagcttattacagttcaaactttttaaaccactgactcattatgtgtaactgttatcaataattctagctactcacatctttcaggagcgagtagccgcaatctcttgatgtcttcttgatgtcttcttgtcggttgaaaatgaaagttcggtagtcacacaattcaaacgttcccgcctccatgggcagatagccaatcatagtttagcatatggggtggcacttggggtggccaatcagattccaggggtagcacgtgccacccctggccaccccctagacacgcccctgGTGCGCGCGCAGTTATTATATTAAACCTGAACACATTTCTTGAACAGACTAATATAAAACAAATCTGATAAATAATGTACCGTCACATCGGGTATTTATCCTAAAACTAATGTGACATATATGCACAATACGTAACATGATTATGATCTTCTCAGTTGATTGAATGATTTTTAGCTGATATATTTAATATTTTTAAATTCAAAGCATATCAAAACACTGTTATATTAATTTAATAATTAATAGAAAAAGTTTATCATTAAACCCCAATGTGACATGTGACATGTATGCGGTCTATttatttatttttaatatattattattataatattCTGAGATTGAAGTGGTAAATTTAATAGAAAACATAACAGGGAGAATCCTTCTCTCACATATATATGGTTTTCCTCTTCTTCAAGTCTGTATTCTTTTCTTTCTAGTTGGCCAGCATCAGCTGACGGGCCACAAAGTGGCAGTGAAGATCCTAAACCGACAGAGGATCCGCAGCCTCGATGTCGTCGGGAAGATCAAACGGGAGATCCAGAACCTCAAAATGTTCAGACACCCACACATCATCAAGCTGTGAGTGGAGAGCCTTCTGACCCCTGCTGTGGCACGTCTGTTTACCACCACTAAGCCACACGGACTGAGCACGCCCACTGGCTCCCAGGAGGCCGAacacacacacacacacacacacacacacacttcttggttcaaaTCCTCCAGTTAAGGAGATAGAAGTCGCGCTTCCTGCCAGACTAAATCCTCACCCAGGTGCCTCGGCTCCTCTTGTTTTCCTTTCCTCTGACCTTGTGTACCTTCGGTTTCTCGGTtctctctctctctcctccctcctctctcctcgtccctctcAACAATCTCCCGTGTTATTTTTAGACGAGGGGTTAGTGGTACGGCAGACATGTGAGCTCCGTGGAACACTCCTCACAAACGTATACAGTAACACACACACATATTTCAGGAATAAGTATACAAGTCTTAACATTTCCCTTAAATGCTctccaagtttagatttcttaatacatatatatatatatatatatttatatatatatatatatttctaatacatatctataaatatatatatatttctaatatatatatttatatatatatatatgtatttctaatatatatatatttctactataaatacacatatatatatatatatgtgttcaggtaccaggtgataagtacgcccacagacttcttcatggtcatggagtacgtgtctgGAGGGGAGCTGTTTGACTACATCTGCAAACATGGCCGGGTAAGAGCCAGTTATTATGGGATAGGAAGTGCGTCTCCTCTCGTTCACACCCTGATGGTGTCTCGCAGGTGGAGGACAAGGAGGCCTGCCGGCTCTTCCAGCAGATCATCTCCGGCGTGGACTACTGCCACCGGCACATGGTGGTCCACAGGGACCTGAAGCCCGAGAACGTGCTGCTGGACGCCAACAAGAACGCCAAGATAGCCGACTTCGGTAGGAACCACAGAACCgggggggggggggggggggggTTGGCAGAGGAATATGTCCAGGGGAATTTaagaagaaaagaaagaagaaagaaagCATAACCGAATATGTGGGGTGGGGCAACGGGCAGATCTCATATCGTGTCTGGCTGGAATTCTTGAGGCCCAGTGTCATCCGATAGGAAAGGAATAGCAGGGGGGGGGGGGCAACAGTGAGAGTGTTAAAGGCACAGGGAAGATGGGCTCAATAGCAATGGTGTGTTATAATAAGGGGGTGTGGGGTCTGGGGGGGGGGtCACACAGTGCAGGGGGGTGTTGACGCGTCTCGTTTTGGGCCGACAGGTTTGTCCAACATGATGTCGGACGGCGAGTTCCTGCGGACGAGCTGCGGATCTCCAAACTACGCCGCGCCGGAGGTCatctcaggaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTCTCCTTTCCTGTAACAAAGGATTTTTACAGGAGACAGAAAGAAAGAATGGGGAGAGAGGGGGGCGTAAGGGAGGAGGGGGGAGAGAGACCATCTCCCACCGACCCGGTGTTGAGTCTATTTGACGTGACGGTCTTTCACTGCATTTCTTAGAGCAACCTTTAAAAGGAAATGTCCCCACGCGCCGCAACATCTAACATTTATAACCAATAAAAGGAGCGTTAAACCCACAAGAGTGACTGcccccccccccccccccTCAGGCTGTACGCCGGCCCCGAGGTGGACATCTGGAGCTTGGGGGTGATCCTGTACGCGCTGCTGTGCGGCACGCTGCCCTTCGACGACGAGCACGTGCCCACGCTGTTCAAGAAGATCCGGGGGGGCGTGTTCTACATGCCCGAGTACCTGACCCGGCCCGTGGCCTCGCTGCTCGCCCTCATGCTGCAGGTGGACCCTCTGAAGAGAGCCTCCATCAAAGACATCAGGTGCCCCCCCCCcGCCCGTTTGAATCCTCCTTTCTTAAATTCCTCCTCTCGCCTTTGACTCATCGTTCTCTCTCTCAGGGAACACGAGTGGTTCAAGCGGGACCTGCCAGGCTACCTGTTCCCCGAGGACCcGTCGTGCGACTCCTCGGTTCTGGACGAGGAGGCCGTGAGGGAAGTGTGCGAGAAGTTCGAATGCACCGAGACGGAGTTCATGTCCAGCCTGTACAGCGGAGATCCTCAGGTACACTTAGTTAAAGAgttgaaaagtcattgaaaagtcgtggaaaagttgtgaaaaagttgtggaaaagtcgtgaaaaagttgtggaaagtcgttgaaaagttgaggaaaagttgtggaaagttgtggaaaagtcgtgaaaaagttgtgataaagttgtggaaaagtcgtgaaaaagttgtggaaaagtcgtgaaaaagttgtggaaaagttgtggaaaagtcgtggaaaagttgtggaaagtcgttgaaaagttgtgataaagttgtgaaaaagttgtggaaagttgtggaaaagtccttgaaaagtcgtgaaaGGGcccccccccccccccccccccccAGGACCAGCTGTCCGTGGCCTACCACCTCATCATAGACAACCGGCGCATCATGACCCAGGCCAGCGAGTTCTACCTGGCCTCCAGCCCGCCGCAGGGCTCCTTCATCGAGGAGGGCATGCCGCTGCCCCCCGGGGTCAAGCCCCACCCCGAGAGGATGCCCCCGCTGATGGCGGACGGGCCCAAGAGCCGCTGCCCGCTGGACGCGCTCAACACCACGCGGCCCAAACCGCTGACGGTCAAGAAGGCCAAGTGGCACCTCGGCATCCGGAGCCAGAGCCAGCCGTACGACATCATGGCCGAGGTGTACCGCGCCATGAGGCAGCTcagcttcgactggaaggtaacacacacacacacacacacacacgcacacacacgcacacacacacgcacacacacacatattctctggtgtgtaatgaagtctctacagaggtgtgtagaggcccatctccagtgttctagtggtacattgtgttatcgccttagaagactagcggaggggtagaaaacccttgaaaaccctttttatgtgagcgcagctgaaaacagttatgctggtgcgagaagctataaaactggccttcctttgagccacaagaagaacaacattaatatttacaatacaaatcattatttataacctggtcaatgtcttgactatattttatattcatttagcaatttatttgatgaataaaagtgtgagttttAGTCACCGGGCTCTGCCTGCAGGCGGTGAGCCCGTTCCACCTGCGCGTGCGGAGGAAGAACCCGGTGACGGGCACCCTGGTGAAGATGAGCCTGCAGCTGTACCAGGTGGACTCCAGGTCCTACCTGCTGGACTTCAAGAGCATCGACGGTGGGTCGCCGGGCGGAAAACACGCCTCGTTTAAAAGACTGGAGATGATGTCATCAAGTTATCAGGAGCACGATCCAACGGTGTAACACTACAGTGCTACCCCCCCCTTCTGCCCCCCCCCTTACAGATGACATCATCGAGGCGGCGGGCTTCAAGCCGGGTCCCTCCGCCCCCCAGAGGTCGGGCTCCACCGCCGGCCTCCACCGGCCCCGGCTGAGCGTGGACCCGACCGCCGACCTGCCGCAGCTAAGCTCCTCCCTCCCGGGGTCGCTGACCCCGCTCAACCCCCCGCGCCAGGGATCGCACACCATGGACTTCTTTGAGATGTGCGCCAGTCTGATCACCACACTGGCACGCTGAATGGCAGAGCGGCAACAGCCGAAACACGAAGGCCGGGTAAAGATCGGCCATTACATCCTCGGCGACACGCTGGGAGTGGGAACCTTCGGGAAAGTGAAGATTGGCCAGCATCAGCTGACGGGCCACAAAGTGGCAGTGAAGATCCTAAACCGACAGAGGATCCGCAGCCTCGATGTCGTCGGGAAGATCAAACGGGAGATCCAGAACCTCAAAATGTTCAGACACCCACACATCATCAAGCTgtaccaggtgataagtacgcccacagacttcttcatggtcatggagtacgtgtctgGAGGGGAGCTGTTTGACTACATCTGCAAACATGGCCGGGTGGAGGACAAGGAGGCCTGCCGGCTCTTCCAGCAGATCATCTCCGGCGTGGACTACTGCCACCGGCACATGGTGGTCCACAGGGACCTGAAGCCCGAGAACGTGCTGCTGGACGCCAACAAGAACGCCAAGATAGCCGACTTCGGTTTGTCCAACATGATGTCGGACGGCGAGTTCCTGCGGACGAGCTGCGGATCTCCAAACTACGCCGCGCCGGAGGTCatctcaggaagGCTGTACGCCGGCCCCGAGGTGGACATCTGGAGCTTGGGGGTGATCCTGTACGCGCTGCTGTGCGGCACGCTGCCCTTCGACGACGAGCACGTGCCCACGCTGTTCAAGAAGATCCGGGGGGGCGTGTTCTACATGCCCGAGTACCTGACCCGGCCCGTGGCCTCGCTGCTCGCCCTCATGCTGCAGGTGGACCCTCTGAAGAGAGCCTCCATCAAAGACATCAGGGAACACGAGTGGTTCAAGCGGGACCTGCCAGGCTACCTGTTCCCCGAGGACCcGTCGTGCGACTCCTCGGTTCTGGACGAGGAGGCCGTGAGGGAAGTGTGCGAGAAGTTCGAATGCACCGAGACGGAGTTCATGTCCAGCCTGTACAGCGGAGATCCTCAGGACCAGCTGTCCGTGGCCTACCACCTCATCATAGACAACCGGCGCATCATGACCCAGGCCAGCGAGTTCTACCTGGCCTCCAGCCCGCCGCAGGGCTCCTTCATCGAGGAGGGCATGCCGCTGCCCCCCGGGGTCAAGCCCCACCCCGAGAGGATGCCCCCGCTGATGGCGGACGGGCCCAAGAGCCGCTGCCCGCTGGACGCGCTCAACACCACGCGGCCCAAACCGCTGACGGTCAAGAAGGCCAAGTGGCACCTCGGCATCCGGAGCCAGAGCCAGCCGTACGACATCATGGCCGAGGTGTACCGCGCCATGAGGCAGCTcagcttcgactggaagGCGGTGAGCCCGTTCCACCTGCGCGTGCGGAGGAAGAACCCGGTGACGGGCACCCTGGTGAAGATGAGCCTGCAGCTGTACCAGGTGGACTCCAGGTCCTACCTGCTGGACTTCAAGAGCATCGACGATGACATCATCGAGGCGGCGGGCTTCAAGCCGGGTCCCTCCGCCCCCCAGAGGTCGGGCTCCACCGCCGGCCTCCACCGGCCCCGGCTGAGCGTGGACCCGACCGCCGACCTGCCGCAGCTAAGCTCCTCCCTCCCGGGGTCGCTGACCCCGCTCAACCCCCCGCGCCAGGGATCGCACACCATGGACTTCTTTGAGATGTGCGCCAGTCTGATCACCACACTGGCACGCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF16579	AdenylateSensor	Adenylate sensor of SNF1-like protein kinase	Domain	Interproscan
PF21147	AMPK_alpha_AID	AMP-activated protein kinase, alpha subunit, autoinhibitory domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR028375	Homologous_superfamily	KA1 domain/Ssp2, C-terminal	Interproscan
IPR032270	Domain	AMPK, C-terminal adenylate sensor domain	Interproscan
IPR049020	Domain	PRKAA1/2, autoinhibitory domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24346	MAP/MICROTUBULE AFFINITY-REGULATING KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-