Detailed information of HS04320 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS04320CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPchr52413150924145982-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF13330Mucin2_WxxWMucin-2 protein WxxW repeating regionFamilyInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008969Homologous_superfamilyCarboxypeptidase-like, regulatory domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR025155DomainWxxW domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR039675FamilyCartilage intermediate layer protein 1/2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15031CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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