Gene detail

Detailed information of HS04316 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS04316	ATP SYNTHASE DELTA/EPSILON CHAIN	chr5	23959401	23964659	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS04316

ATGGCAGCCAGGTTCCTCCGCCGCTCCCTCCCCGTGCTGAGGCAGGCTCGCCGCTACGCCGAGGCCGCGTCCGCCGGCCCGCAGATGTCCTTCACGTTCGCCTCCCCGACGCAGGTAGCTCGCTAACCTCGACCCGAGGCTTATCGGGGCCTAGCTAGCTAGACGGCTAACCAGTGGTATTTCTTGTTGAAATTTACTCTCAAAACGTGGAGACAACGTCTCGTGCGTGGGGTGTTGTACTAATGCGCGGCGGTTGGAGTCATTGCCACGCGGACAGGTACATTTCGTGGACGGTTGGTGGACGATGTAGCATAGCTTGTTTTAAGCTACCTGTCATTCGCTGTCTTTGAGCAGAGTTTACTTCGCGAAACTATCCTCCTCTTTTCCCAGTTCAATAACTGTGTGGATATTTTTTTTAAATTCTACGTTGTCGGGTTTAATATGAACTCTTATTGTGAAGAGGTCGCTTGGCTGCAGTGCGGTTAAAGCTCTCTAACCTTGAGGTTCGTGTCTGACTAAATTCAGCCCACTGGAGCTCCACTTTCACACCGGGCTGCAGGTGTACTTCACATCCTGATGTATTCAGATTATTATTCTATTAAAGTACAAAATAAAAAACATTTTAAACGCAAACAAATCTGTATTTATTTAGCATAAAACGTCAAGTGACAGGTGACAGTGAGTGGTCACCTGTTGTTAATTCCACATGTCTTATGTCCGTGAGTCAGTGAATGCATCTCTCCATCTCCTGTCTCCACTCTCCAGGTGTTTTTCAACGCGGCCAGCGTGAAGCAGGTGGACGTGCCCACGCTCACCGGGGCGTTCGGTATCCTCCCCGCCCACGTGCCCACCCTGCAGGTGCTCAGGCCCGGCATCGTGACGGTCTTCAGCGATGACGGCACCGCGGCCAAATTCTTCGGTGAGATTTCGTACCCTTCTAAAAAAAGCAAATCAGTTTACCTGCTGAAAAAAAAGAAAAATACATTCCTTTGATGCCTCCACAACAGGTGTAGGTAGAGCATAGCCCAGAGTCCTTTTATTACACTTTATTAAAAAAGAAAACAATGTCAGATCACGACTTATTACGTAGTCTTACACTAGTTAGTACGTTCAGGTTTTTTGTGCCTCTCGGCTCAACATACTGAAATGCCTAACATCTGCTCTGACATCACTAATATCTTTAATTCCCAGTCAGTCTAGAGATCAATACATATTTTGCCCCACTTTCCGGCTGCCGCCCCCCCCCCCCCATTTTTATTTGAGTTTTTTTGATTGATCTTTCTGAAAGTTATTCACAGCTCATTTCGCTATTAAAATAGCTCCGACATCCTCATGATTCGACAATCTGTCTTGTCTCGGACTCGAAGAAGCTGAAGcagggctcgtacggtcacggaaaacctggagaagtcatggaattttaaaatggtcatttccaggcctggaaaagtcatgaaaaaaaacttaaatcataaaagttttggcaaagtcatggaaatttgttaaaatcacatgttcatttacgccgagtttgaaataataaaaacatttttttaaagaaagacgctcaaaatataagccggcgtacgctctcgatacgcacaattttcaaaaatgttcatgtttataccgagatttcagtttggtcatggaaatttggtttaaagtcctggaaaagtcctggaaatccattggtcaaaatgtgtaagaaccctgctgaaGTTATGTAATGAAAACTTAAAAATCCTAATTTCTTGGTGAAATGATTTGGTTCCTCAATTTCCAAAAACACACATGGATGAACAAACCCTCGGGAACAGAAGCCAGCCTGAGAGCGAGGCAGGAGGTCCTGGCTCTATAACGGCATCATTggttataaaacacagtgaagatgactgtatattggcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcagtgagcagtgggtcaataacagtcaaCGCTGATTCTTCGGTGCAACTGCTCGTCGAGGAGGCTGCATCTTTGGACCAGCTGGACATCGCTGTGAGTATAACGTCAACATCGCACACAAACTAGAGCGGCATCTGTGCTAATGTTGGACAGACTGACCATAAATACCACCAGATTATTAGAATTTGTCAAATATATATATTTCTTGCTGTAAATGTCTTTTTTTTAATGTATATACGTTgTTGAAATGATAGTATATCATTCTGCATACTGTTTTTGACATTATCCATATCGCTCAACATCACCTGCATTACTGAGTGTGTTATCTTATTGTGTAgCCTACTTTAATCCACACACAGGGGGAGGAGcTTATAGAGACTCTCTCCTCATAAAGAGTTTGCATTGCAGATTTTGAGGGAGAAGCAAGAGTTCCCATGCAACCTATAAGTAGGCACAGGAGTTAATGTTGGACACGTTGGCTTGAAAACAGGAGAAATAAATGAGATTAAAATACTGGAAAGTATCAAATAAACtGGAATGAAACTTGTATTCTTCATGTAACATTTTATTATTAAGCTGACTCACAACTACTCAACATTGAGGGGATTGAAAATGACGACCGTGTTTTTAGATTCCGCTGACGGCCGGCGGTCGTCCCGGCAACCGCTTTTAAACGTGAGCCTTGAGTCTCGAGTGGTCTTCGAAGTGGAGCGTCTAAATATAGCTGCGTGCTGCATCGTGTTCCAGAACATCACAATGGAGAGAGAAATCAATaCAGAAAAGTAGGAGAGAGCCAGTGAAATGAATCCAGtTAATAAAATAAAGAAAACGCACTTCTCGACAGTCTCAACGCGAGTTTCACAGAAGTCGTTAATGTTGAGTTAAGTGACTGGATGTCGTCGTACAGGTGATATTTACCTTCTATATGATTTGAACTAATGGTAGTGGCATTGAGGTCttTTtTTaAAAACAGGAAAcGTGGCtTTTTTTATTATgTaTtTATTTTTTAcTATtAAGCAAAACACTgttccacgaagaacctttcaaaaaagggtcctttaaagaactatttccttaaagagttcttcaaagaaccttcaacacatgtttctttaaggcaccatttctggttcctcaaagaacctttcaaactaagttttattttttttaaagaaccatttccttaaataattcttcaaaagaacctataaaagtgtctcaaagaaccttaaaaaaatggttctttaaggcaccaattttggttccacaaagaacctttcaaaccaggatttttttaaagaacaatttccttcacgagttcttcaaagaacctataaaggtgtctcaaataaccttaaaaacatggttctttaaggcaccatttctggttcctcaaagaaccttttaaactaaggttttttttcaagaaccatgtccttaaataattcttcaaaagaacctataagtgtctcaaagaaccttaaaaaaatggttctttatggcaccatttctggtacctcaaagaacctttcaaaccaggatttttttaaagaaccatgtccttaaataattcttcaaaagaacctataagtgtctcaaataaccttaacaacatggttctttaaggcaccatttctggtgatggttcttcgtagaaccacaaagccttttaaagaatcttttaagaaccgttatttttcTGgGTGCCGTCGGCTCTGCACTTTGATTTCACTGTAAAAAGTTAAAGTTCTCCTTTTTGATATGATGATGATGCCGTGTCCGTTTCTTCCCTTCAAAGCACAAACTGTAGAGGAGGCGTTGTCCCCCTCGTGTTACCGGGCGGATTGTTGCCCGTCGCTTTGTAAAGACTTCCTCcTCACGTGGCACATCGAGCTGAAGCCGCCTCCTGCGTCCACCGGCGTGTATTTATTGATATCGCGGGGTTGAAGTCTCGTGTGGGGTCGCTCgATCCTTCATGGATCTTTTGAGTGGAATGCCATTTGTGTGATCGGTGTCCGTACCCAGCctcCCGCTCTGATCCTCTCCGCCGACgATTATCCATCCGATCGGCGCCGCGTCGAAGCCCTCGTTTAAATGTCGGTCTCGTTAGCGTCGTTTCGCGCTCGGCCCCGGACGCCGCCCGCCTCTGACCTCGGGGCAGTGCCACTGTCGAGTGGACTCTCTGGCAGTAAATTAGTTattcccccccctcATTGTCCTCCGCGCCGCGGGGcGACGCACACGGACGCCACGCTGTTCATCGGGAGGGAAAGGTCAGTCGCTGTTGAGTTATAGCAGATGTGTCAAAGCCCCACTGGGAGACCTTTAACTCCCAGCTATGTTTGGCATTTCTGGTTTCTAATCACTACCGTGACGAATGGAGCTTTCACGGCCGAGAGGCGGCGGCCGCTTCCTCCGCTCGCCGACTTTTGACTCGTCGCTTTTCTGACTTCCAAATGGCAGTCGGAGGTTTTTTTAGGTGGAGCCTGGCGACGTCTAGACTGCAGGCAAATCCAGATTTGCTTCTCAAATCCGGTCTTGTTAAGGCGGGACTGTCCGCGCTTGTTCTCTGCGAGGCGTCGTGTGTTTTTGTCTCCGATCTCTCCGCGTGCGATTGCTTTGGTCTCGAAAGCCAAAGCCCCAGGAGGCCACTTCTTAGTGGTTTTCCTCCGCAGCGcCCGCCTCAGAATCGCATCtCAAGCCtcaattcaattcagtttatttgtacagcccaatttcacaaattacaaatttgtctcggagtgctttacaatctgaacacatagacatccctgtccccaaaacctcacatcggaccaggaaaaactcccaaataacccttcaggggggaaaaaagggaagaacccttcaggagagaacagaggaggatccctctccaggatggacagatgcaatagatgtcatgtgaccagaaggacagTAGCCTCAACATCCAATATGCACCAAAAAAGTGCACGTCATGCATGtTTTttgttgTTGTTTCTACACAATCGGGATGTGcccccccccccccccccccccaaAAAAAAGAGAACCGGCAGTCGGACCGGGGcAACgCGGCTGAATCTAAATGTGTGGCGTTATCGTTTCGCTTTCCtGTTTCTCTTCTCTATTTTTAGGCTGCCAGGGCCAACCTGGAGAAGGCCCAGTCcGAGATGGCGGGCGCGTCCGACGAGGCGGCGAGGGCGGCGGTCCAGATCAGCATCGAGGCCAACGAGGCGCTCGTCAAGGCCCTGGAGATGGCAGCCAGGTTCCTCCGCCGCTCCCTCCCCGTGCTGAGGCAGGCTCGCCGCTACGCCGAGGCCGCGTCCGCCGGCCCGCAGATGTCCTTCACGTTCGCCTCCCCGACGCAGGTGTTTTTCAACGCGGCCAGCGTGAAGCAGGTGGACGTGCCCACGCTCACCGGGGCGTTCGGTATCCTCCCCGCCCACGTGCCCACCCTGCAGGTGCTCAGGCCCGGCATCGTGACGGTCTTCAGCGATGACGGCACCGCGGCCAAATTCTTCGtgagcagtgggtcaataacagtcaaCGCTGATTCTTCGGTGCAACTGCTCGTCGAGGAGGCTGCATCTTTGGACCAGCTGGACATCGCTGCTGCCAGGGCCAACCTGGAGAAGGCCCAGTCcGAGATGGCGGGCGCGTCCGACGAGGCGGCGAGGGCGGCGGTCCAGATCAGCATCGAGGCCAACGAGGCGCTCGTCAAGGCCCTGGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02823	ATP-synt_DE_N	ATP synthase, Delta/Epsilon chain, beta-sandwich domain	Domain	Interproscan
PF21335	ATPD_C_metazoa	Metazoan delta subunit of F1F0-ATP synthase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001469	Family	ATP synthase, F1 complex, delta/epsilon subunit	Interproscan
IPR020546	Domain	ATP synthase, F1 complex, delta/epsilon subunit, N-terminal	Interproscan
IPR036771	Homologous_superfamily	F0F1 ATP synthase delta/epsilon subunit, N-terminal	Interproscan
IPR036794	Homologous_superfamily	ATP synthase delta/epsilon subunit, C-terminal domain superfamily	Interproscan
IPR048937	Domain	F1F0-ATP synthase delta subunit, C-terminal domain, metazoan	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13822	ATP SYNTHASE DELTA/EPSILON CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000275	Cellular Component	obsolete mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)	Interproscan
GO:0015986	Biological Process	proton motive force-driven ATP synthesis	Interproscan
GO:0045261	Cellular Component	proton-transporting ATP synthase complex, catalytic core F(1)	Interproscan
GO:0046933	Molecular Function	proton-transporting ATP synthase activity, rotational mechanism	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-