Gene detail

Detailed information of HS04075 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS04075	UNCHARACTERIZED	chr5	16932451	16935627	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS04075

ATGGCTCAGAAGAGGGCTGTACTGTTAGAGAAAAGGATTAGGAGGGAGAAGGAGAGCCAGCAGAAGAAGATGCAGCTGGAGGCTGAGTTGGAGCAGAAGAAGGAGGAATCTCGGTATGTTCACACAAAAAGAAATAAATAAGTCTACTGTCATTTTCAATACCTGTTCTCATTTTCAAAACACACAGGTCTATCAGGTATAGGCAGGATTGTTTGTCTTTTGTTTTTTCTGTTCTAGCATTTTCATGTTGGTTGGTTTTTAAATTAAGATTTAAATTAACAATGTAGAACTTAGTTGATACTTGATTGACTTATAATCACCATTCCTGAATAATAAAGTGTAACAGTGTTTGTCTGCACTGACTCCTGACTGGCCGTTCAGAATAAAAGCAGTGGAGGAGCGCATCAGGAAGGAGGAAGACAAGACCAGGAGGGAGTTCATCAAGCAGGAATTTCTCAGAAGGAAGCAGCTCAAACTGGAAGCGGACATGGATACCATCATTAAACCACGACCAGTCGCAGCCAAGCAGAAACGGAGGCGTCCAAAGTCCCTCCATCGCGACAGGTAACCATGGAGACGATGATGACATGATGATAGACTGAATGTATGTATTTTTATTTGTCAACTATATTAGGCATTATAGTGTGTGTATTAATACATATTTATGTATGTATTACAGGGTGTTTCAAGGTGAGTTTTGTGTGTATAACTGGATGTTTGAGTTTGATTCATAACACTGAAACTGCATTGCTCTGTGACAGGGTCGGCTCAAAACACAGTGGACAGCCTGGTGGGAttgttgttgtggttgttgttcttcatggtgtCATGCTGTGTCACATCCAGGTTCACGCCAACGTGTCTTTTCAGTCTCCAGCTTGTCCCTTGCTTCTCTCAACCTGGGAGAtAGCGACAGTGTTCACTCTGAGAAGAGATCACCAAGGTGAGATATTTTCTAAAGCTGCTGGTGTAACATGTGACATGTAATAAAAAAGGTGGCATTTTTGTCTTGGCTTTAGGTTTGATGTTTCAGGGTATTTTCACAAGATGTCATACTTTTGAATAACTAGGGAATATAGAAGTGGAATAGGTTAAGTAAAACATGAGTGTGAAAACCTATTCATGCCAGTTAGTGCTGTGATGTACTGTATAATCAAATCAGGAATCCTAAAACTAAATAAAAAAATCAAACCCTGCaataataatataataataataTTTCACAATGGTTCACTTGCTTTAAGGATTACAGGTACTAAGCCACTGTAAAATGAGCATTGAATCTATGCATAATGTATCCAGTAGAATGGGTTTTTGGCACACTATATACACACACTATATATTTGGTTACTATAATGTTCGATTACTTTTTAATTACATTTAATGATATGTTATGGCATATTGTATTTGGATTATTTAATTTGAGACCTGAACATTTCTGAGACATTTTTACTTTGGATTAAATTTGAAACAAAATTCTTTAATTTCTCATCATGTGCTTATATTTTCTGACCTTTCTTGTTTGTTTCTTTTAAACAACTTCTCCAGACAAGGTCTTCTTTCTTCGGCATAACATTTCTCTTGTATTCTTCTGCCTTCCTTCCTTTAATATTTCTTTCCTTCTGTTTCACTAGCGTCAGAAGTGCTAGTTTAGCCTCTAGTGGTCTCTTCTAATTTCTGAGATGAACTTAAAACTTTAACCATAAACCTAAACTGAGAAGGAGAAGGTTAGTCTTCTATCCCATTGGAAGATCATCAGGCCTTTTGAGAAGTTTAAGCTAAAATGACTTGTTACTCTGGGCGGCTTACATAAAGTTTTACTTTATGTGCATTATGAACCCAGTGGAAAAAGCTGACTTGGAAACCACTTATTCACATATATATGGCGATGTGTCGCCACATAAGTTCAGAAAAATAGAGCAAGTAAATATCTAGTGCTGCACTATAATTGATTGACCTTTTTTCTATTGACCTATCACTGCACTCACTGCCTGTGCTTGCAAGCGTTGCTTCTTTTCTTATTACTGTTAGGATGTCACACCAAGCCCAAACCTTTGCGCGTGTTTTAGACCAGATTCTGCAGATGGATTTCTGTCCCCGAGTCGATCTGGCAGCAGGAATGGAGAGAAGGATTGGGAAAATGGGTCCACGACCTCCTCTGTTACATCAAACACGGAGTACACTGGTAGGACTGGCTGACTTTAGTTTAAGTTTAACATAATTAGATTGGAGGATAAATATAATATTAAGGCATAATTTATAACATGTACTAATGTCATGAAATGACTTATTTTCTAATTGTTGTATCCAGTGCAGTTAAGTCAAACGCTTGTCTCACTGCCTTGTGAGACAATCGAAGTTGGCAACAGTTCCATCCTGATGTTTTCTCCTTTGTTCTCATTCAGGACCAAAGCTATACAAGGAGCCCAGTTCCAAATCTAATAAGCACATCATTCAAAATGCTCTGGCCCACTGCTGCCTCGCAGGCAAGGTTAATGAGGCGCCAAAGAACAAGATCCTGGAGGTAACGTCTTGGGGCTTTTACAAAAGTACAATATAAAACGTAGAAACAAATTAGTAAAATCCATTTTTTAACCAAAACAGTATTTCAATAAAAAGGAAGAACACAGCAAATTGATTAGCATGACAGGTCTTTGTTACTTTGTTGGTCTACTGATGGAATTATTGTCGTAGAAATGTATGTGTTATAATTACAGAAACAACATTTGAGCATTTAAGGCTCAATCAAAGGGCGGAGACACTTTTAAATAGCTGAATGTATGCTTGTGAGTCAAATGTCACCAAAACCTTTGCCTTCCTTTAGCATTCATGACCTTCATCTAATGAGTCTTTCTCCCCTGATATTAACAGGAAATGGAGAAATCAGAGGCAAACAACTTTTTGGTTTTGTTCCGAGATGCAGGCTGTCAGTTCCGCTCCCTCTACACGTACTGCCCCGAGATGGATGAGATCAACAAGCTGACAGGCATCGGCCCCAAGAGCATCACGCGCAAGATGATCGAAGGTCTCTTCAAGTACAACTCGGACAAGAAGCAGTTCAGTCAGATACCAGCCAAGACCATGTCGGCCACCGTGGACGCAGTTACGATCCATGGCCATCTCTGGCAAACCAAGAAGCCAGCCACCCCTAAAAAAGTAGTGCCTGTCCAGTTCTAAATGGCTCAGAAGAGGGCTGTACTGTTAGAGAAAAGGATTAGGAGGGAGAAGGAGAGCCAGCAGAAGAAGATGCAGCTGGAGGCTGAGTTGGAGCAGAAGAAGGAGGAATCTCGAATAAAAGCAGTGGAGGAGCGCATCAGGAAGGAGGAAGACAAGACCAGGAGGGAGTTCATCAAGCAGGAATTTCTCAGAAGGAAGCAGCTCAAACTGGAAGCGGACATGGATACCATCATTAAACCACGACCAGTCGCAGCCAAGCAGAAACGGAGGCGTCCAAAGTCCCTCCATCGCGACAGGTCACATCCAGGTTCACGCCAACGTGTCTTTTCAGTCTCCAGCTTGTCCCTTGCTTCTCTCAACCTGGGAGAtAGCGACAGTGTTCACTCTGAGAAGAGATCACCAAGACCAGATTCTGCAGATGGATTTCTGTCCCCGAGTCGATCTGGCAGCAGGAATGGAGAGAAGGATTGGGAAAATGGGTCCACGACCTCCTCTGTTACATCAAACACGGAGTACACTGGACCAAAGCTATACAAGGAGCCCAGTTCCAAATCTAATAAGCACATCATTCAAAATGCTCTGGCCCACTGCTGCCTCGCAGGCAAGGTTAATGAGGCGCCAAAGAACAAGATCCTGGAGGAAATGGAGAAATCAGAGGCAAACAACTTTTTGGTTTTGTTCCGAGATGCAGGCTGTCAGTTCCGCTCCCTCTACACGTACTGCCCCGAGATGGATGAGATCAACAAGCTGACAGGCATCGGCCCCAAGAGCATCACGCGCAAGATGATCGAAGGTCTCTTCAAGTACAACTCGGACAAGAAGCAGTTCAGTCAGATACCAGCCAAGACCATGTCGGCCACCGTGGACGCAGTTACGATCCATGGCCATCTCTGGCAAACCAAGAAGCCAGCCACCCCTAAAAAAGTAGTGCCTGTCCAGTTCTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08683	CAMSAP_CKK	Microtubule-binding calmodulin-regulated spectrin-associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011033	Homologous_superfamily	PRC-barrel-like superfamily	Interproscan
IPR014797	Domain	CKK domain	Interproscan
IPR032940	Family	Calmodulin-regulated spectrin-associated protein	Interproscan
IPR038209	Homologous_superfamily	CKK domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21595	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0007026	Biological Process	negative regulation of microtubule depolymerization	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0031122	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0036449	Cellular Component	microtubule minus-end	Interproscan
GO:0051011	Molecular Function	microtubule minus-end binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-