Gene detail

Detailed information of HS03816 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS03816	ALDEHYDE DEHYDROGENASE-RELATED	chr5	7227560	7231981	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS03816

ATGGCCCAGTCAATCCTCGACACCATGCCCGGAGCCACGACGGGCACCGTGCTGATCTCAGACCCGCTGAACTTCTGGGGTGGGAAGCGAGTGAAGCCCATGCAGGACAAAAACACGGAGCCCGTGTTTGAACCCGCGACCGGTAAATGCTGCGGTCTGGTCCGTTTTGTGACgAGGTCTCTTGATAATTACATTTGTGATGTGTATGTTAAAGCTTGGCAGGTTCACTATGAGGACACGGAACCCCTCCGCACTTATTCTTCTTCTATGGTGGAGTAACTTGGGAAAAGTCTACGACGCTTTATCAGTACCAAGTACGGACTTGTGTGCGCGCGCacaatttcggtcaaaagtaaaaagacggtgctctaggtcaattttcaattttaatatcaagttatatatcttaaccgtgccgcaagtcaaactgacttaacgttttctgatgagaaataataaactatgagactaaagattgttgacctaattgtctatcatgtttcacaaccacagagatgtTGTGATGTGTTCGCACTtGTTATAATAAGCTTAATACACATTATTAAAGCTATACGACTGGTTGCAACACGTGGCTGCATGTAGGAATAAGTGAGGCTTCTCCGCAGCTCTTTACCAATTCTGTCGTtTATcTTAGCGCTCAGCCCGGCTGTAAACCTGCTAATCTTGTTTGTGCAGGCCGCGTCTTGTGTCAGATGGTTCCATGTGGAGCCGAGGAGGTGGACGAGGCCATCAAGAGCGCCCATGCTGCCTACCTACAATGGCGCAAGAAGGCCGGCATGGAGAGGGCGAGGGTGATGTTGGAGGCCGCCCGCATTATCAGGGTGAGCTGGTTCAATGTCATCCAGTCTGGAAACCAGCCTGATTTCAGTGTTGTGCAACACAAATTAGAACAGAGTTTGGCAAGTGTAAGACACTAGTTATTCATTAACATGCCCCCCGGTCCCCCCTTCTACTGCCGACCTACATTTGCACACAATAAAAACCTTTTATCTGTCCGTGCGGCCATATTGATGTCATGCAGGTTTGGATTTTAACCTCAAttgttccgattcatcttatcatcttaacccttgtgttgccttcgggtcaatttgacccgattcaatgtttcaccctcctgtcgccttcgggtcaatttgacccgattcaatgtttcaccctcctgtcgccttcgggtcaatatgacccgattcaatgtttaaccctcctgttacctttatatttactgacatattttaccctttaggtcaatatgacccgaaggcaacacaagggttaaagccatATCTGTAATAACACCAAATTACCCCATATATGTTTAAACAGTTTGGTAAGCGTTTGCATTCAAGTTTTTTTGTTTGGTTTTCTGTTATTTCAATACAAATAGGAAAGAAGGGAGGAAATTGCAAAGCTGGAAGTGATCAACAATGGCAAGTCCATCACTGAAGCGCTGGTTGATATTGATGTTGCCTGGCAGTGCATTGAGTACTATGCTGGCATGGCTGGTACACTCGCAGGTGGGTGCACAAACACTTTTAGTTTTTTGCCAAATAAAAACTAAATGTGAAGTAAAcATTTTTTTAAAGCTGTGTTTTGTTCATCATAGGCCAGCACGTCCAGCTCCCTGGCGGATCGTTTGCTTACACCAGGAGGGAGCCCCTTGGCGTGTGCGTGGGAATCGGTGCGTGGAACTACCCCTTCCAGATCGCATCATGGAAGTCTGCTCCTGCTCTGGCATGTGGTGAGTGTCTGACTTTGAATGGtTTTTTTTTTTGAGACAAAAGTTGATTTATTTCTAACCACTAAAACTTCGACCTGCCGTTTTAAAATGCGTGTGTTGTGTTCAGGTAACGCCATGGTATTCAAGCCCTCTCCGATGACCCCTGTGACGGCCGTCATTCTGGCCGAGATTTACAAAGAGGCGGGGGTGCCCGACGGGCTCTTCTGCGTGGTGCAAGGCGGGGCAGACACCGGCACCTTGCTCTGCCAGCACCCGAAGGTCGCCAAAGTGTCTTTCACCGGCAGTGTGCCCACGGGCAAAAAGGTACAGTGAGCTTCTTTGACTAAAACCCAAATTTGAAAGAGGTGAACGCTGTGACCACACCGCTCATACACATCGTGACTGCATGTATTCTTGCCAGGCAGCTTGATTCTGAAAGGTTTGCACTGTGTTACAACATACCAATAACAGGACTTTAATCCCATTTGACGCAGATAGGAGACATTGATCACAGTCAACTTTTTTCTAAATATTGCCAAAGAGCAGAAATGTATTGCAGCAATATCAAATTATTTGTGCTTTGTCATGTTTAAGTTCTCCATGAGGCTTCAATGGTCCGTGTTGTCATTACGTGTTCTCCTTGCCCTCAGGTCATGGAAATGTCTGCAAAGGGGGTGAAGCAGGTGACTCTGGAGCTTGGAGGGAAATCCCCCCTCCTGATCTTCAAAGACTGTGATTTGGAGAACGCAGTGAAGGGAGCGCTTATGGCAAACTTCCTGACACAGGGGCAGGTGAGACCGTTGTGTCATTTCTGTCTCGTCCGGCGTTGTTGCTCCGCCCGATCCAATGCATTCTTTATTTCtgtgtgtgtgtgtgtgtATAGGTTTGCTGCAACGGCACCAGAGTGTACGTGCAAAGAGAGATCATGCCCCAGTTCCTTGAGAAAGTCGTGGAAAGGACCAAGGCCATCCCAGTGGGTGACCCCCTGTTGGACGGCACCCGGATGGGCGCGCTGATCAGCAAGCCGCACCTGGAGAAAGTGCTGGGATTTGTCACCCAGGCCAAGAAAGAGGTGCGCCCCCTAACCCTCTCTTaGTCGTTAGAGCAGCGGAGCCGTTTTCTAATCCCTGTGGTAGAATCGAaCAACGTGAGAGGCGTTTATCTGAGAGGGAATCTgtggggtttttaccttcaagataaagccctgctagttcaattatcagaccaactccaatgaccacagatgacagactcgagctcgtagttttacttgtcacaaggagaatgcctgagctgtgcctctgcacgtctccaaaacactctggctccattctaccccgacagtccttttattgaagcaagtggttacacaaaacaggacgaggtctcttatcagtatgggctttgttccaaaccttgttcctgtgtctgctcattaaccagatgtgaccctggaacctcttgctctcagggtgaccggtatagaataaacaacacagcaataatatgattgtaattattaatcttcttctaataattacaaccccgaggagtaaacaataattcatagggcgtacattctttaatacaaattggaaacacatgctctaaaaccaaacAGAATCTGCCGCCAGTGTTTTCATACAGACCTCAGAGCAGTTGTGTGAAGTTTATTCATACTTTTTCCCGGTTGTCATAATCATTTTCGACGAATGTCTATTTTTCCAAGGGAGCCAAAGTGCTTTGTGGAGGAGAGCCTCTTGTCCCCAGTGACCCCAAATTGAAAGGGGGCTACTATATGGCACCTTGTGTGCTTGGTAAGTGACGATACACAATCGCACAATGACATCTATGTTGGGTCCTGGTGTGCATCGCGTGCAGTCTTGTCTGTTCCCTCCCCCCGATGCAGACGACTGCAGGGATGACATGACCTGTGTGAAGGAGGAGATCTTTGGCCCGGTCATGTCGGTGCTGCCTTTCGACACAGAGGAAGAAGTGCTCGCGAGAGCCAACgACACCACGTTTGGTTTGGCCTCTGGCGTCTTCACCAGGTCAGCAGAGGACACGCATGCACTGCCTTGGAAGTTTGTCAtgACTACTGATTCGCAACGCTGACcGTTTGCTCTGAGAGATAATGCGGGTATCGCATTCCGTTGGCTTtTGTGCAGGTTTTCTGCAGAGCAGCAAAAAAatGTGGAATATGTGGCACAACAGTAGTCTGAGGCCGGAGGGTGTGATCAGGTTGCATACAGACTTTTCTTTTGATgATTGAAGCTGAGCCGCGTTCCTTTCCTCTGACTGCAGGGATATTTCCAGAGCACATCGGGTGGCTGAGAACCTGGAGGCAGGGACCTGCTTCATCAACAACTACAACATCAGCCCTGTTGAAgTGCCATTTGGAGGaTACAAGATGTCAGGTGGGGTGCTTTTTATTTtGTAAAAAaTaTTTTTGAAGGTTCAAATGTTCCGGATTATTAAGAAAATGCATATcTAGTATAAAATGTATTTGCAGCGAGTGACCTGCATTATCTTTACTGAGATGAAAGCAGGtTActTcACTAAAAaAAGATATCTCCTGTGCTGCGCCAGGTTTTGGCAGAGAGAACGGCCAGGTGACAATCGAGTACTACTCCCAGCTGAAGACGGTGGTTGTGGAAATGGGCGACGTCGAcAGCCTCTTCATGGCCCAGTCAATCCTCGACACCATGCCCGGAGCCACGACGGGCACCGTGCTGATCTCAGACCCGCTGAACTTCTGGGGTGGGAAGCGAGTGAAGCCCATGCAGGACAAAAACACGGAGCCCGTGTTTGAACCCGCGACCGGCCGCGTCTTGTGTCAGATGGTTCCATGTGGAGCCGAGGAGGTGGACGAGGCCATCAAGAGCGCCCATGCTGCCTACCTACAATGGCGCAAGAAGGCCGGCATGGAGAGGGCGAGGGTGATGTTGGAGGCCGCCCGCATTATCAGGGAAAGAAGGGAGGAAATTGCAAAGCTGGAAGTGATCAACAATGGCAAGTCCATCACTGAAGCGCTGGTTGATATTGATGTTGCCTGGCAGTGCATTGAGTACTATGCTGGCATGGCTGGTACACTCGCAGGCCAGCACGTCCAGCTCCCTGGCGGATCGTTTGCTTACACCAGGAGGGAGCCCCTTGGCGTGTGCGTGGGAATCGGTGCGTGGAACTACCCCTTCCAGATCGCATCATGGAAGTCTGCTCCTGCTCTGGCATGTGGTAACGCCATGGTATTCAAGCCCTCTCCGATGACCCCTGTGACGGCCGTCATTCTGGCCGAGATTTACAAAGAGGCGGGGGTGCCCGACGGGCTCTTCTGCGTGGTGCAAGGCGGGGCAGACACCGGCACCTTGCTCTGCCAGCACCCGAAGGTCGCCAAAGTGTCTTTCACCGGCAGTGTGCCCACGGGCAAAAAGGTCATGGAAATGTCTGCAAAGGGGGTGAAGCAGGTGACTCTGGAGCTTGGAGGGAAATCCCCCCTCCTGATCTTCAAAGACTGTGATTTGGAGAACGCAGTGAAGGGAGCGCTTATGGCAAACTTCCTGACACAGGGGCAGGTTTGCTGCAACGGCACCAGAGTGTACGTGCAAAGAGAGATCATGCCCCAGTTCCTTGAGAAAGTCGTGGAAAGGACCAAGGCCATCCCAGTGGGTGACCCCCTGTTGGACGGCACCCGGATGGGCGCGCTGATCAGCAAGCCGCACCTGGAGAAAGTGCTGGGATTTGTCACCCAGGCCAAGAAAGAGGGAGCCAAAGTGCTTTGTGGAGGAGAGCCTCTTGTCCCCAGTGACCCCAAATTGAAAGGGGGCTACTATATGGCACCTTGTGTGCTTGACGACTGCAGGGATGACATGACCTGTGTGAAGGAGGAGATCTTTGGCCCGGTCATGTCGGTGCTGCCTTTCGACACAGAGGAAGAAGTGCTCGCGAGAGCCAACgACACCACGTTTGGTTTGGCCTCTGGCGTCTTCACCAGGGATATTTCCAGAGCACATCGGGTGGCTGAGAACCTGGAGGCAGGGACCTGCTTCATCAACAACTACAACATCAGCCCTGTTGAAgTGCCATTTGGAGGaTACAAGATGTCAGGTTTTGGCAGAGAGAACGGCCAGGTGACAATCGAGTACTACTCCCAGCTGAAGACGGTGGTTGTGGAAATGGGCGACGTCGAcAGCCTCTTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016160	Conserved_site	Aldehyde dehydrogenase, cysteine active site	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR029510	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11699	ALDEHYDE DEHYDROGENASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004029	Molecular Function	aldehyde dehydrogenase (NAD+) activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan
GO:0019145	Molecular Function	aminobutyraldehyde dehydrogenase (NAD+) activity	Interproscan
GO:0047105	Molecular Function	4-trimethylammoniobutyraldehyde dehydrogenase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-