Detailed information of HS03689 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS03689UBIQUITINchr526352602636444+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF01020Ribosomal_L40eRibosomal L40e familyFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR001975DomainLarge ribosomal subunit protein eL40 domainInterproscan
IPR011332Homologous_superfamilyZinc-binding ribosomal proteinInterproscan
IPR019954Conserved_siteUbiquitin conserved siteInterproscan
IPR019956DomainUbiquitin domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR038587Homologous_superfamilyLarge ribosomal subunit protein eL40 superfamilyInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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