Detailed information of HS03667 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS03667TRNA MODIFICATION GTPASE GTPBP3chr519540741972514-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01926MMR_HSR150S ribosome-binding GTPaseFamilyInterproscan
PF10396TrmE_NGTP-binding protein TrmE N-terminusFamilyInterproscan
PF12631MnmE_helicalMnmE helical domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004520FamilytRNA modification GTPase MnmEInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR006073DomainGTP binding domainInterproscan
IPR018948DomainGTP-binding protein TrmE, N-terminalInterproscan
IPR025867DomainMnmE, helical domainInterproscan
IPR027266Homologous_superfamilyGTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1Interproscan
IPR027368Homologous_superfamilytRNA modification GTPase MnmE domain 2Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031168DomainTrmE-type guanine nucleotide-binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR42714TRNA MODIFICATION GTPASE GTPBP3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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