Gene detail

Detailed information of HS03514 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS03514	PHOSPHATIDYLGLYCEROPHOSPHATASE AND PROTEIN-TYROSINE PHOSPHATASE 1	chr4	33111764	33125415	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS03514

ATGTCCGGGGCGCTCGCGCGGCTGCTGTTCTACCCGACGCTGGCCTACAACGTGCTGCTGGAGAAACTCACCGAGCGACGCTGGTTCGACCGCGTGGACGAGACCGTGATCCTGGGGGCGCTGCCCTTCAGGGCCAGCACCACGCAGGTGAGGGCgacgagcacctggacgagcacctggacgagcagctggacgagtagtacctggacgagtacctgtaggagtacctgtacaactagtacctgtacaactagtacctgtaggagtacctgtatgtacaactagtacctgtacaactaataaccgtagtagtagaacctgtagtagtaccagtggtagtacacatagtagtacacgtagtaggacccgtagtagtacctgtagtagtacccgtagtagtagtagtacctgtagtagtacctgtagaagtagtagtacacgtagtagtacctgtagaagtacctgtagtagtagtacacgtagtagtacctgtagtagtaccagtagtactactacacatagtagtacctgttgtagtacccgtagtaatacctgtagaagtacctgAACCACACTGGAAATACGCCACTCCAAGTTAAAGTATTTAACGTCGGGCctaacaacacccttgaagcggacattattgacgacaaagaactacctcgagtactttataatacaaagtactacctcgagtactttataatacaaagtactacctcgagtactttataatacaaagtactacctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataatacaaagtactacctcgagtactttataatacaaagaactacctcgagtactttataatacaaagtactacctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataaaactttgtattataaagtactacctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttaaaatacaaagtactgcctcgagtactttataaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagcactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttaaaatacaaagtactgcctcgagttctttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataaaacaaagtactacctcgagtactttataaaacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataacagtactgcctcgagtgctttataatacagtactccctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactacctcgagtactttataaaacaaagtactgccttgagtactttataatacaaagtactacctcgagtactttataatacaaagtactacctcgagtactttataatacaaagaactacctcgagtactttataatacaaagaactacctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactacctcgagtactttataaaacaaagtactgcctcgagtactttataacacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataacacaaagaactacctcgagtactttataacacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcaagtactttataatacaaagtactgcctcgagtactttataatacaaagtactacctcgagtactttataatacaaagtactacctcggtgctttataaacaaagtactgccttgagtactttataatacaaagtacttttataatacaaagtactacctcgagtactttataatacaaagtactacctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactacctcgagtactttataaacaaagcactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcagtactttataatacaaagtactgcctcgagtactttataaacaaagcactgcctcgagtactttataaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataatacaaagtactacctcgagtactttataatacaaagaactacctcgagtactttataatacaaaatactacctcgagtactttataatacaaagtactacctcgagtactttataaaacaaagtactacctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataatacaaaatactacctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctccagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactgcctcgagtactttataacacaaagtactgcctcgagtactttataacacaaagaactacctcgagtactttataacacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttaaaatacaaagtactgcctcgagtactttataacacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataacacaaagaactacctcgagtactttataacacaaagaactacctcgagtactttataacacaaagaactacctcgagtactttataacacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataacacaaagaactacctcgagtactttataatacaaagtactgcctcgagtactttataaaacaaagtactgcctcgagtactttataacacaaagtactgcctcgagtactttataaaacaaagtactacctcgagtactttataacacaaagaactacctcgagtactttataatacaaagtactgcctcgagtactttataatacaaagtactacctc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atggcgttgacattgagcatttgaacgtcttcccacagaatcctcttctgtcagaccacaacctcataacttttgaatttatactaccggagtgtactccgttagtcaaaagtttctacactagatgtctaactgatagtgctgtagctaaatttaaagcgattccttctgtatttgattcgatacgtctcaatataacagaggactcctggtctaactttagtccgtcccagattgatcatcttgttgacagtgccataggctctctgagaatgacactggactcgatagccctctgaagaagaagacagtgaggaagaggaggtttgctccctggtataacctcagaccgaaactgaagcaaactgaagcgtcaaagcttgaacgcatatggcgctcaactaatctcaagaatcccgcttagtttggcgagatagtcttaaaacatataagaaggccctccgtaatgccagagcagcctattactcatcaataatagaaaaataaaacaaccccaggtttctcttcagcactgtagccaggctgacagagagtcacagctctgtggagccgagcattcctataaaccttagtggtaatgactttatgaacttctttaatgaaaagattttaactattagggacaagattaataatcttgcccataaccagtgccaatctgtcctcaagtggaatggccttgaaaccgctgtatgccctggtgtatatttgagggttttctcctatcaaccgtgaccaattattttcaacggtttctacttcaacacgcctacctgtctcttggaccccatcccgacgaggctgcttaaagacgttttgcctttaattggcggctctctattagatattatcaatgtgtctctgctaacaggccacgtaccacactccttcaaggtggctgttattaaacctctcctgaagaagcccactctggatccagaggtattggctaactacagaccgatctctaacctcccttcctctccaagatccttgagaaagtggtcgcaaatcagttgtgcgactttctacatcataatagtttatttgagaaatttcaatcaggatttagaaaacaccacagcaccgagcggcactggtgaaaattacaaatgacctcttaatggcagcagataaaggactcctctctgtcctggtcttgttagaccttagtgctgcattcgacaccattgaccatgacatcctgttacagagactggagcagtcgattggcatttcaggcacggcactaatttggtttaaatcctatttatcagatcgatctcagtttgtatttgtaaacgatgacgcctcgataaccaccaacgttaatcacggagttccacaaggttctgtgcttggaccaattttatttaccttatacatgcttcctttgggcaatattatcaggaaacactccataaactttcattgttatgcagatgacactcaactatatttatcgataaaaccagaggagagcaaccaactctgtaaaattcaagcatgtcttaaagacataaaaacatggatgacctgcaacttcttgatgttaaactcagacaaaaccaagtaattttaatcggccctgagcacctcagagatcaattatctggtgatgtggattctgtagacggcattgccctggcatccaacaccactgtaaagaatcttggcgttatctttgatcgggacttgacctttaactcccacgtagcaaatctcaaggactgcattctttcatctacgtaatatttcaaaatcaggcacatcttgtctcaaaagatgcagaaaaattggttcacgcttcacatttcgagactggattactgcaactccttattagcaggctgctctaataaatctcttaggtccctccagttgatccagaatgctgcagctcgtgttctcactaaaactaagaaaagagatcacatcactcctgcactagctgctctgcactggctcccagtaaaatcaagaatcacttttaaaattcttctcttaacctacaaagccttgattggtgatgctccatcatatcttaaggagcttgtcgcaccatattgccccactagagagctacgctcactaaatgcgggactacttgtagttcctagagtcttaaaaagtagaatgggagccagagcctttagttatcaagctcctcttttatggaaccagcttccaatttcagtccgggaggcagacacagtcacctcgtttagagtagacttaagaccttcctctttgacagagttatagttaggctgaatcaggtttgccctggtccagccccttgatatgctgctataggcttatagctgccggggaacgtttaggatgcactgagtaactacctcctctttttctctccttaaggatgaattttcatctctcaatcacacgttactaactctgctttctcccggaagtccttttgactttacgcctcatggggtcatcggaccctatgagacggcatagatcctatctgcctgatggatcgcctgggtcgtggaattcctgctcatgactacgccactgtcctgttgagactcgccactcctcctccccaccgccatctgcctgatggatcgtggagtctccatcgtggaatatgcctactatgaactattcatacactctgtcatattcattgaatgtattttaactctaaatctgtccttctgtacacattacatctattgcatctgtccatcctaggagagggatcctcctctgttgctctcctccaggtttcttcctttttcccctgaagggttatttgggagtttttcctggtccgatgtgaggttttggggcagggatgtctatgtgtacagattgtaaagcactccgagacaaatttgtaatttgtgaaattgggctatacaaataaactgaattgaattgaattgctgattggttctcacctgagctctgctgattggttctcacctgagcGTTTGATTGGCGGCAGGAGTGGCGAGCGGCGGGGGCGGAGCAGCTGAGGCTGAGCACGGTGGACTACACCGGCGTCCCGAGCCTGGAGAACCTGCGGCGCGGCGTGGACTTCGCCCTGCGGCACCGGGAGCGCGGCGGCAGCGTCTACGTCCACTGCAAGGCCGGCCGCTCCCGCAGCGCCACCATGGCCGCCGCCTACCTCATCCGGGTCAGGCTGGtcctcttcctcgccttcttgctccacttgttgttcttcttctttttgttctacttgttcttgtctttgttcttctacttgttctcctggttgtggttgttgttcttcctcttcttctccttgtggtttttctacttttccttattgttgttgttcttcttcttgctctccttcttgttcttcgtgttcttattctcctttttttgttcttctttttggtttacctgttcttgttgtttttgtttttctccttgttcttcttattgttgttcttctacttgttattctccttgttcttgttgttgttcttctttatcttgttgttcttctttatcttgttgttcttgttctccttcttcgtgttctggtttttttttgttctccttttcgtttttcctattcttgttgtttttgttcttgttgttcttcggcttgttgttgttgttcATGTCCGGGGCGCTCGCGCGGCTGCTGTTCTACCCGACGCTGGCCTACAACGTGCTGCTGGAGAAACTCACCGAGCGACGCTGGTTCGACCGCGTGGACGAGACCGTGATCCTGGGGGCGCTGCCCTTCAGGGCCAGCACCACGCAGCTGGTGGAAACAGAAAATGTCCGCGGGGTCATCACCATGAACGAGGACTACGAGACCAGATACCTCTGCAACTCAGCCGAGGAGTGGCGAGCGGCGGGGGCGGAGCAGCTGAGGCTGAGCACGGTGGACTACACCGGCGTCCCGAGCCTGGAGAACCTGCGGCGCGGCGTGGACTTCGCCCTGCGGCACCGGGAGCGCGGCGGCAGCGTCTACGTCCACTGCAAGGCCGGCCGCTCCCGCAGCGCCACCATGGCCGCCGCCTACCTCATCCGGGTCAGGCTGGtcctcttcctcgccttcttgctccacttgttgttcttcttctttttgttctacttgttcttgtctttgttcttctacttgttctcctggttgtggttgttgttcttcctcttcttctccttgtggtttttctacttttccttattgttgttgttcttcttcttgctctccttcttgttcttcgtgttcttattctcctttttttgttcttctttttggtttacctgttcttgttgtttttgtttttctccttgttcttcttattgttgttcttctacttgttattctccttgttcttgttgttgttcttctttatcttgttgttcttctttatcttgttgttcttgttctccttcttcgtgttctggtttttttttgttctccttttcgtttttcctattcttgttgtttttgttcttgttgttcttcggcttgttgttgttgttc

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00782	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000340	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR042165	Family	Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1	Interproscan
IPR044596	Family	Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46712	PHOSPHATIDYLGLYCEROPHOSPHATASE AND PROTEIN-TYROSINE PHOSPHATASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004439	Molecular Function	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	Interproscan
GO:0004721	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0008962	Molecular Function	phosphatidylglycerophosphatase activity	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-