Gene detail

Detailed information of HS03504 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS03504	COCAINE AND AMPHETAMINE REGULATED TRANSCRIPT PROTEIN	chr4	32933316	32934905	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS03504

GGGGGCGGGGCTTACCGAGTCCGTATAAGAGAGCGTGCAGGTCCGGTGTGTGGAGCGAGACTTCCCGGTGGtcctgctgctacctcctcctcctgctcctcctgctcctcctcctcctgctcctcctgctcctcctcctcctgctcctcctcctcctcctcctccAGCACCATGGACAGCTCCGGGATGCTGCGtGCGCTGCTGCTCGCCGCCCTGCTGTGCGTCGCGTGTCGCGGACTGACGTCCCAGGAAGTCTCCGAGGAGGACTccggaccggaccgagccgagccggaccgggaccTGGTGAGACCCGGGAGGGTTCAACTTTCTCAGAATTAACAAGCTTCTTCTTTCCGTGTGTATTTGTTCATGTGTCGATGTTTCAACGTTTCTATAATTTACATTTTATAAAGATAAAAATAAACAAGTGCATCTTTTTTTGTTTAGTTCAGCTTCAGAGGAAAATAACTTGCTGAAATTATTTGAAATAACTGTTTTTATTTGTATCTGTTTTATTGCGCAACCGTTTAAAAAGACATAACAGATATAAGTGTCAAACATAACTTATAGATCAGTTGATTTTTGATTATTATtattatcagatgttctgtattacagatgttctgAAACGTCatgtgcaaccgagatattatctcattaagtatgtgctaatttatgaaagattataaaaaagaaatgtaaaatttgggggaagccgggtaaaaaaaaatggtgtaaattgttgttgacatattaagagtgtggtctgactcctcctccttgccgtctgactcctccttcttgtgttctgactcctccttcttgtggcctgacccctcctccatgtgtttgactcctccttcttgtggcctgacccctcctccatgtgtttgactcctccttcttgtgacctgactcctcctccttgtggcctgaatcctccttcttgGTTCCTGCAGGTCTCGGCTCTGGAGGTTCTGCTCAGGGAACACAGTCGGGTTCGCCCCGCCGAGAAGAGAGGAAGCATCGCTATGGTGACGCTCTACTCTCTGATCATGTGACacacctgtacctgagagagtgatgtcatacacctgtacctgatagagtgatgtaatacacctgtacctgagagagtgatgtaatacacctgtacctgagagagtgatgtaatacacctgtacctgatagagtgatgtcatacaccgttacctggtatagtgatgtaatacacctttacctgagagagtgatgtaatacacctttacctgatagagtgatgtaatacacctttacctgagagagtgatgtaatacacctgtacctgatagagtgatgtcatacacctttacctgagagagtgatgtaatacacctttacctgatagagtgatgtaatacacctttacctgatagagtgatgtcatacaccgttacctggtatagtgatgtaatacaccCCCTTTACCCCCTCCCCCCCCTCCAGTGTGGGACAGGTGACCGCTGTGCCGTGAAGTTCGGGCCTCGCATCAGGAAGCTGTGTGACTGCGGCCGAGCAGCCAACTGCAACTCCTACCTCCTCAAGTGCATCGGGGGCGGGGCTTACCGAGTCCGTATAAGAGAGCGTGCAGGTCCGGTGTGTGGAGCGAGACTTCCCGGTGGtcctgctgctacctcctcctcctgctcctcctgctcctcctcctcctgctcctcctgctcctcctcctcctgctcctcctcctcctcctcctccAGCACCATGGACAGCTCCGGGATGCTGCGtGCGCTGCTGCTCGCCGCCCTGCTGTGCGTCGCGTGTCGCGGACTGACGTCCCAGGAAGTCTCCGAGGAGGACTccggaccggaccgagccgagccggaccgggaccTGGTCTCGGCTCTGGAGGTTCTGCTCAGGGAACACAGTCGGGTTCGCCCCGCCGAGAAGAGAGGAAGCATCGCTATGTGTGGGACAGGTGACCGCTGTGCCGTGAAGTTCGGGCCTCGCATCAGGAAGCTGTGTGACTGCGGCCGAGCAGCCAACTGCAACTCCTACCTCCTCAAGTGCATC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06373	CART	Cocaine and amphetamine regulated transcript protein (CART)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009106	Family	CART satiety factor	Interproscan
IPR036722	Homologous_superfamily	CART, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16655	COCAINE AND AMPHETAMINE REGULATED TRANSCRIPT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005184	Molecular Function	neuropeptide hormone activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0008343	Biological Process	adult feeding behavior	Interproscan
GO:0009267	Biological Process	cellular response to starvation	Interproscan
GO:0032099	Biological Process	negative regulation of appetite	Interproscan
GO:0043410	Biological Process	positive regulation of MAPK cascade	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-