Detailed information of HS03496 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS03496AGGRECAN/VERSICAN PROTEOGLYCANchr43277497632785655-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00193XlinkExtracellular link domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000538DomainLink domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR050691FamilyHyaluronan-binding ProteoglycanInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22804AGGRECAN/VERSICAN PROTEOGLYCANInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001501Biological Processskeletal system developmentInterproscan
GO:0002052Biological Processpositive regulation of neuroblast proliferationInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005540Molecular Functionhyaluronic acid bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007417Biological Processcentral nervous system developmentInterproscan
GO:0010001Biological Processglial cell differentiationInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0072534Cellular Componentperineuronal netInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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