Detailed information of HS03469 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS03469SIN3B-RELATEDchr43226815932281931+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02671PAHPaired amphipathic helix repeatRepeatInterproscan
PF08295Sin3_corepressSin3 family co-repressorDomainInterproscan
PF16879Sin3a_CC-terminal domain of Sin3a proteinFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003822RepeatPaired amphipathic helixInterproscan
IPR013194DomainHistone deacetylase interacting domainInterproscan
IPR031693DomainSin3, C-terminalInterproscan
IPR036600Homologous_superfamilyPaired amphipathic helix superfamilyInterproscan
IPR039774FamilyTranscriptional regulatory protein Sin3-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12346SIN3B-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000118Cellular Componenthistone deacetylase complexInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0016580Cellular Componentobsolete Sin3 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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