Gene detail

Detailed information of HS03293 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS03293	DELTA(14)-STEROL REDUCTASE	chr4	24188474	24195728	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS03293

CACCTGGACTCCGGGAGGAAAGAAGAGACGACCAGCCTCCCTCCTCTGTcTGTTATCTACCGGTAAGTGCACGCCGGTGTAATAgtCATAATAATGCGGTGTAACGTGTGTTATACTGTTGAAGTCGCACGGTTCGGGTTACAAAaGATATACTGGACGTGTAACGTCACCGTAATTATTCGAGGTAGTTCGCGGCAATTAAAGTGGCGGAGAAGTTTAGCGGGTGTAATACACGGGAAGTGCTAAAGTGCATCTTAAGGcATACCAACACGATGAGAAAGGCTTCGTCTTTGTTGACGTTATGCAACCGTGTGAGCCTGCTGCTCTCCCAGCGGCCCTGGCAATACCTTTGCTCCAGAAGTGTGCGCGCGCGCGCGTGAGTGCTTTACCATCATCATTGGTTCATAAATAAGTAGCCTGTGGAACCACATTGCATGTATCTAAACGTGTCACCACACATACCCTGCACAAcCaCCCCCCCCCTTTTTCTTCTAATTTtgtatatatatttttctgtatgtaattatgtatgtatgtGTCCACGTCTCAATTCGTACTATATTTAAATGTACCTTAAGTTGCTGTTATCGTTGTTTGATCATTGAAATTGTAATTCTTCTAGTGTGTCACAGTTACACAACCtccaaacgattgaatgtaaaggtctgtataccccaacttattggaggtggtattattcttcattcctgtgtttgcaaaatcaataaaaagtattaaacaaaaacaaaaAGTGAATCGGTAAAACAAATACAAAAGTAGATGACATTTTCATCCACTTTCACTTTGGAATTGTCACAGAGTGCCATTTGGTCCTTAAACACAACTGTGTATAAAGTACGGCGAGCCGCTGCATAACCAGTCTTGTCCTGATAACTTGACCCTTCACCAGAAAAGGAGCGGTGCAGCAGCCaATGGAGGCCTCAAGGAGACGAACCCAGCACGGGGCCAACCGGGCCAACGGGAAGGACTCAGAACAGGGGGAGCAGCCGGCGCAGTGGGGGCGAGCGTGGTGAGTTGGTGACACTTCACAGGCTGCAGAAGGATGTTCACCACAAGCCCATTATGAAGTTAAAATGGCCCATGATCTGACTTAATTGATACGTGGCCAAATAAGATtGTGTCCTCTGGGCCGTAGAGCGTAATGTTCTGATGCTAACAATAGAGGACTGGGTTGTGGAGAGAGAGGCATGCTGTCTTACAACTttattaccttcgcattgaaaatgcggacggttatgttttgatcgccgtgtatttatttatttgtatgcgtgttcctcgcataactaaaaaagtattaaaccgaatcgcatgaaatttggtgggatgattggttattatccggggaccatttgattagattttgggatcgatcatgtcaaaggtcaaggtcatgaaaaggtcaaaatcttctttttaccatagcgtggtaaatttgtatccaattagcaACTaatcagaatcagaatcagaatcagaaacaggtttattgccaaagaatgaatgttttcacaaacaagcgatattgccaaagaaaatgtttttcaaacaaaacaagatttttggtggaaggtgcaacatttggacatgacaaacaacaatcaacgcagagaggaggagggagaacgcaaggaggaggaggagtgggaggaagggaggaggaggaagaggaaggaggcggaagaaggaggagaggaaggtggaagaagaggtggtagtctgggggtgacagtcagtcgtcccgggtcgatgaatgagccgccgcccgggtcgggaaaaaagtatgtgtggaggtcggtggtgatggtgatggacctcccgcctcgaggagaggaggaggagtgtccagggggagtgtccaggtgggagacaatcaCAATCTTTccaacatgttcataattcaatgcccaatcttgtgatatgcgaaggtatgcgctctaccgagtgcccgttctagttattacTGTTTCTTACTAGTTGCGCTTACATTGTAGTAATAAGTGCATCATAGCGTTGCTCACTTGAAGTTTAATTTCTTTTTTTCCTTCCTCTTCTGTTGCAAGTTTGAGATATGGAATAGACCCATCAGCTGTCCAGACGTGTCCACGTTtGCGTTCTCAAAACTTGTTTTTTAATCTTATTTgAATGTTGTGGTCTTCTAACACTGAATCTGAATTTCTCGTAACATTTTGAACATCAGGACCCCTCACAGTTTAGACTTGTGACAACATAAATAGGATTTCAGTTGACTTCTTTTTTCTCAAGGTTTGTCCATGAAACACACAGTGTCGCCAAATGTTTTTAAAAACCTCCCTCACACCTGTGTGCATATCTGACTCGCCCGCAGGGAGGTGGACTGGTTCTCCCTCGTCAGTGTGATCGCCCTCCTCTGCTTCGCCCCCTTCATCGTCTACTACTTCGTGATGGCCTGTGACCAGTACCAGTGCTCCGTCAGCCAGCCCCTGTTGGAGTTGTTCCGAGGAGAGACCACGCTGCTCTCCATCTGGGCCCGGTCACCCTCCATAACCTGGGCCGCTGCCAAAATATATGCCGCCTGGGTTGGCTTTCAGGTAAGGAGGAGGCGTGTGAAGGGGGCCGGGGGGGGGGaGTCCGTTGTGCGTtGTCTTTAGCTCTTGCTgtcgcGTCGTCCCTCAGGTGTTCCTGTACATGTGCGTTCCTGATGTGACCCATAAGTTTATTCCCGGCTACGTCGGTGGAGTGCAGGATGGAGCACGAACTCCCGCTGGTAATTTacacacacacacacacagaaacacacagaccccccccccccacacacacacacaGTGCTTTTATTACACATTCATTACCATGTCTCTCTACATCCAACCCCCAGGCCTGATCAACAAGTACGAGATCAACGGGCTCCAGTGTTGGCTGATCACTCACGCTCTGTGGTGCGCCAACGCCCAGCATTTCCACTGGTTTTCTCCCACCATCTTATTCGACAACTGGATCCCCCTGATGTGGTGCGCTAACATACTGGGCTACGCTGTGGCCAGCTTTGCTTTCGCGAAGGCCTACCTCTTCCCCACCAACTCGGAGGACTGGTGAGTGCCGACACACATGCtcaaggattcaacggtcatttattgatcgtcatgcgacgcgcatgacggaacacagttgtagcttgtggtttgtaacacgtgacaaatgcaacaaaaacagtaattatgcattactgaactgattttgttAAATGTTTATTCGGGGGATGTAAAAACAaatatggccaacatcttcatattacaaactcaacattaggaaaacattgttcatcaacttacaatatgtttgagcaccaagcattatgatttaaacacagGCTAAAAAAATATTATaaaaagaatgccacacgaccattcacgtacactgggcatacactagcgcgagctacgagctagcctaaacatggttataatggttaattaccttcgcattgaaaatgcggacggtaatgttttgatcaccgtgtatttgtatgcgtgcgtgcgtgttattctcataagtaaaaaagtattaaaccgaatcgcatgaaatttggtgggatgattggttattatccggggaccatttgattacattttgggatcgatcgggtcaaaggtcaaagtcaaggtcatgaaaaggtcaaaatcttctttttaccatagcgcggtcaatttatatccaattggctggcaactaatgccaaaatgttcataattcaatgcccaatcttgtgatatgcgaaggtatgcgctctaccgagtgcccgttctagtttattatttgttggcttacttttatgaatgcaatacttgcaatcaatgttacggcactaatctgagttaaggctgctcttgtcatcatcggtctccacgtgttcaggtggaccggtctccccatcgcgcccagcctgaccgctgatgtgctcctcagggctcacgtagtcaaacacggtgcacgcttccgctttcaaagttaaatgataggctaccgtaacctgctgacagggcggagtcaccagagaagttcaaaatattttaaatttttttattttaatcggctcaggcaccgaaatgtgcgttgcgtttcggtccagtcggcaccggtcgtataggaagcggtgccatatcggcatcggttttcggtaccctacTGATAAGAGCCAATCGAGTAGCAAGCGCGGGCGTCTCCGCCATCGTTTCCAAAGAGCTCCCGTAACACGCGTCTATACCAGTTTCCAAACTCCTCCCCTTTCTGTGCTCTAAAACcCCAGCGTCGTCGGGTGCTCAGCGTATGCTCCTCCtTTgTTGTGTGATTCTGCAGCAAGTTCACGGGGAACATCTTCTACAACTACATGATGGGCATCGAGTTCAACCCGCGCGTTGGCAAGTGGTTCGACTTCAAGCTCTTCTTCAACGGCCGGCCCGGCATCGTGGCCTGGACtCTCATCAATCTGTCCTTCATGGCCAAGCAGCAGGAGCTGTACGGACACGTGTCCAACTCCATGATCCTGGTCAACGTGCTGCAGGTGAGGAGCAACGGGCGTGTgCTGAGGCACAAtGGAAGACGgaGAAACAAACGTGGCATATGAAACCCAACTTCTTCGACCttagcaggtccgtctttcaatcagaaggttggaggttcaatccccacccgagtcgatgtgtccttgagcaagacacttaaccctgaattgctccctggagctgcgtctacagtgaatgaatgtaacaggattagaagttgctttggataaaagcgtcagctaaatgacatgtcatgtaacttcttcatgaTATGTCTCTTCTCACACATGTTACATCACTTTAGAGTCTTaaggtgcgttcacaccaaaagcaaaactatttttcgcgtcgcccaaaacgcgcgagtttactcgctcgaccatttgccgtgctcaagccataagcgttgagacgctccgcgaggggcggggcttatctctgtgtctcgtctccgtaaagaccgttatcatctccttcatccaccagaataactaaccactagttctgctttatatttgtcgtggacatcccacacactaacgccctcgtgtttgggttcatgacatcacccgtaggctcactcagctcggtcactgtcaccgatgaagttactgttacgtctggaagacttccgcttcgagcgctacgagagcggaacacgagagctgattggcccgagttgcaagatgaccgcctcaaagttgaaatacttcaactcggggcgaaaattgcgccgctgaaaacgcgtcgccctggaaaatattgcgtctatcgcagccggaaatacgcgtctatcgcagaattttcatgggattcggtcgcgcgaaaaaatagttttgcttttggtgtgaacgcacctttaTTCATCACCTGACATGTGGAGGTTGTGTAAGAATCCcTCCTGATCGATTAACATTCAACATTGACCACTAGATGCTAAAGATTAGGGCTGATCCATTAATTGTTTAGTTTTATATGAAATATCTGATATTGAtTTTTTTaTCCAGgGATTGAGTGGGcTGAACAGGTAATATCAACCAAAATtTAGCATAAGTATTAAGACAGCTGTTAATCCCCAGGATCTGCTTCATGAATTCTTCAATaGTAAACAAACAgGAgATGATTGCAATTCATACCAGACTTTCCGAATCAGAGGGGAGACGTTTAGCGTTGAGAAAAGCGGCAACTCTTTTGGGATAGTACTCAAAAGGGCCGCAGGCCAACAATATATTTCAGAAAATGGACACAGCAGCCATAACGGTTCACTTTTCATGATGGAAAAACATCCAATAGGCAGATgGGTGTCGTGATGGAGCCgGTTCGAGGCCCGTTTAAAAAGTGCATTATATTATACAGCCCCATTAAATATAAGTGTTCATCATTAAGTTTATGGTCCTCTGCTCCAAAGtGACAGTTTGAGTTCACCGTGATCCCCTCCGTCTTTTCACACGCTGCTCGTTGAGTACATTGGGTCTTTCTCGTAGGCCATTTATGTGCTGGATTTCTTCTGGAACGAGGCGTGGTACCTGAAGACCATCGATATCTGCCATGACCACTTCGGATGGTATCTGGGCTGGGGAGACTGCGTGTGGCTGCCCTACCTCTACACACTGCAGGTAAAGCACATATcagggttcgtacggtcatggaaaacctggaaaagtcatggaattttaaaatggtcatttccaggcctggagaagtcatggaaaatacttcaatgataaaagttttggaaaagtcatggaaatttgttaaaatcacatctcatttacggcgagtttgaaataattgatatattttttaaagaaagacgctcgaaatataagccagcgatagctctcaatacgcaacattttctacagttttcatgtttattccgagatttcagtttggtcatggaaatttggtttaaagtcatggaaaagtcctcgaaatccattcgtcaaaatgtgtaagaaccctgACATATGCAGAACGAATATTCATAATCCgTATGCAcAACACGCAGTAGACATGGTGTACATGTGAGCGATGACTTTAATGGACCTTCGCTGCCTTCTGGGTTCATTTCTGTATCCGTGTGTCGAGTGGAAGCATGTGGATGAAATTAAATTTAAAAGAAGATAATGTGTGTGAGTGTGTTGTGGTGTATTGAACACGCTGGAGGTGGACACTCAGATGAaGTCATATTGCGTGACTCGGCGTGACTaCAtGTTGTGGCTCTCCAGGGTCTGTACCTGGTGTACCACCCGGTCCAGCTGTCCAACGGCCACGCCCTGGCCGTCCTGCTGCTCGGCCTGGTCGGCTACTACATCTTCCGCTCCACCAACCATCAGAAGGACCTGTTCCGGCGCACGGAGGGCTCCTGCTCCATCTGGGGCGGGAAGCCGGCGCACATCGAGTGCTCCTACCGCTCCGCCGACGGCGGCGTCCACCGCAGCAAGCTCATGGTCTCGGGGTTCTGGGGATTGGCCCGCCACTTCAACTACACGGGCGACCTGATGGGCTCGCTGGCCTACTGCGCCGCCTGCGGCTTCGGCCACCTCCTCCCGTACTTCTACATCGTTTACATGACCATCCTGCTGGTGCACCGCTGCGTGCGCGACGAGCACCGCTGCGGCAGCAAGTACGGCAAGGACTGGAAGCGCTACACGGACGCCGTGCCTTACCGACTCATTCCCGGGGTGTTTCACCTGGACTCCGGGAGGAAAGAAGAGACGACCAGCCTCCCTCCTCTGTcTGTTATCTACCGAAAAGGAGCGGTGCAGCAGCCaATGGAGGCCTCAAGGAGACGAACCCAGCACGGGGCCAACCGGGCCAACGGGAAGGACTCAGAACAGGGGGAGCAGCCGGCGCAGTGGGGGCGAGCGTGGGAGGTGGACTGGTTCTCCCTCGTCAGTGTGATCGCCCTCCTCTGCTTCGCCCCCTTCATCGTCTACTACTTCGTGATGGCCTGTGACCAGTACCAGTGCTCCGTCAGCCAGCCCCTGTTGGAGTTGTTCCGAGGAGAGACCACGCTGCTCTCCATCTGGGCCCGGTCACCCTCCATAACCTGGGCCGCTGCCAAAATATATGCCGCCTGGGTTGGCTTTCAGGTGTTCCTGTACATGTGCGTTCCTGATGTGACCCATAAGTTTATTCCCGGCTACGTCGGTGGAGTGCAGGATGGAGCACGAACTCCCGCTGGCCTGATCAACAAGTACGAGATCAACGGGCTCCAGTGTTGGCTGATCACTCACGCTCTGTGGTGCGCCAACGCCCAGCATTTCCACTGGTTTTCTCCCACCATCTTATTCGACAACTGGATCCCCCTGATGTGGTGCGCTAACATACTGGGCTACGCTGTGGCCAGCTTTGCTTTCGCGAAGGCCTACCTCTTCCCCACCAACTCGGAGGACTGCAAGTTCACGGGGAACATCTTCTACAACTACATGATGGGCATCGAGTTCAACCCGCGCGTTGGCAAGTGGTTCGACTTCAAGCTCTTCTTCAACGGCCGGCCCGGCATCGTGGCCTGGACtCTCATCAATCTGTCCTTCATGGCCAAGCAGCAGGAGCTGTACGGACACGTGTCCAACTCCATGATCCTGGTCAACGTGCTGCAGGCCATTTATGTGCTGGATTTCTTCTGGAACGAGGCGTGGTACCTGAAGACCATCGATATCTGCCATGACCACTTCGGATGGTATCTGGGCTGGGGAGACTGCGTGTGGCTGCCCTACCTCTACACACTGCAGGGTCTGTACCTGGTGTACCACCCGGTCCAGCTGTCCAACGGCCACGCCCTGGCCGTCCTGCTGCTCGGCCTGGTCGGCTACTACATCTTCCGCTCCACCAACCATCAGAAGGACCTGTTCCGGCGCACGGAGGGCTCCTGCTCCATCTGGGGCGGGAAGCCGGCGCACATCGAGTGCTCCTACCGCTCCGCCGACGGCGGCGTCCACCGCAGCAAGCTCATGGTCTCGGGGTTCTGGGGATTGGCCCGCCACTTCAACTACACGGGCGACCTGATGGGCTCGCTGGCCTACTGCGCCGCCTGCGGCTTCGGCCACCTCCTCCCGTACTTCTACATCGTTTACATGACCATCCTGCTGGTGCACCGCTGCGTGCGCGACGAGCACCGCTGCGGCAGCAAGTACGGCAAGGACTGGAAGCGCTACACGGACGCCGTGCCTTACCGACTCATTCCCGGGGTGTTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01222	ERG4_ERG24	Ergosterol biosynthesis ERG4/ERG24 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001171	Family	Sterol biosynthesis ERG24/DHCR-like	Interproscan
IPR018083	Conserved_site	Sterol reductase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21257	DELTA(14)-STEROL REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006695	Biological Process	cholesterol biosynthetic process	Interproscan
GO:0009918	Molecular Function	obsolete sterol delta7 reductase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016126	Biological Process	sterol biosynthetic process	Interproscan
GO:0016132	Biological Process	brassinosteroid biosynthetic process	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0016628	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	Interproscan
GO:0030176	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0047598	Molecular Function	7-dehydrocholesterol reductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-