Detailed information of HS03288 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS03288CADHERIN-23chr42359323823818754-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF01049CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000233DomainCadherin, Y-type LIR-motifInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR027397Homologous_superfamilyCatenin binding domain superfamilyInterproscan
IPR039808FamilyCadherinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24027CADHERIN-23Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007043Biological Processcell-cell junction assemblyInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016339Biological Processcalcium-dependent cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0034332Biological Processadherens junction organizationInterproscan
GO:0044331Biological Processcell-cell adhesion mediated by cadherinInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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