Detailed information of HS03249 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS03249WD40 REPEAT FAMILYchr42139374521400610-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF12265CAF1C_H4-bdHistone-binding protein RBBP4 or subunit C of CAF1 complexRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR022052DomainHistone-binding protein RBBP4, N-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR050459FamilyWD repeat RBAP46/RBAP48/MSI1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR22850WD40 REPEAT FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016581Cellular ComponentNuRD complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035098Cellular ComponentESC/E(Z) complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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