Detailed information of HS03207 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS03207PROLYL-TRNA SYNTHETASEchr41978006519805970-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00458WHEP-TRSWHEP-TRS domainDomainInterproscan
PF00587tRNA-synt_2btRNA synthetase class II core domain (G, H, P, S and T)DomainInterproscan
PF00749tRNA-synt_1ctRNA synthetases class I (E and Q), catalytic domainDomainInterproscan
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF03950tRNA-synt_1c_CtRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan
PF09180ProRS-C_1Prolyl-tRNA synthetase, C-terminalDomainInterproscan
PF20974tRNA-synt_1c_C2tRNA synthetases class I (E and Q), anti-codon binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000738DomainWHEP-TRS domainInterproscan
IPR000924FamilyGlutamyl/glutaminyl-tRNA synthetaseInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR002314DomainAminoacyl-tRNA synthetase, class II (G/ P/ S/T)Interproscan
IPR004154DomainAnticodon-bindingInterproscan
IPR004499FamilyProline-tRNA ligase, class IIa, archaeal-typeInterproscan
IPR004526FamilyGlutamyl-tRNA synthetase, archaeal/eukaryotic cytosolicInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR009068Homologous_superfamilyuS15/NS1, RNA-binding domain superfamilyInterproscan
IPR011035Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR016061DomainProline-tRNA ligase, class II, C-terminalInterproscan
IPR017449Homologous_superfamilyProlyl-tRNA synthetase, class IIInterproscan
IPR020056Homologous_superfamilyLarge ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalInterproscan
IPR020058DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domainInterproscan
IPR020059DomainGlutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domainInterproscan
IPR020061Homologous_superfamilyGlutamine-tRNA ligase, alpha-bundle domain superfamilyInterproscan
IPR033721DomainProlyl-tRNA synthetase, catalytic domainInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR049437DomaintRNA synthetases class I (E and Q), anti-codon binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43382PROLYL-TRNA SYNTHETASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004818Molecular Functionglutamate-tRNA ligase activityInterproscan
GO:0004827Molecular Functionproline-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006424Biological Processglutamyl-tRNA aminoacylationInterproscan
GO:0006433Biological Processprolyl-tRNA aminoacylationInterproscan
GO:0017101Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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