Detailed information of HS02961 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS02961LYSYL-TRNA SYNTHETASEchr41216070812165477-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002313FamilyLysine-tRNA ligase, class IIInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR018149DomainLysyl-tRNA synthetase, class II, C-terminalInterproscan
IPR034762FamilyBacterial/eukaryotic lysine-tRNA ligase, class IIInterproscan
IPR044136DomainLysine-tRNA ligase, class II, N-terminalInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR42918LYSYL-TRNA SYNTHETASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0002276Biological Processbasophil activation involved in immune responseInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003877Molecular FunctionATP:ADP adenylyltransferase activityInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0015966Biological Processdiadenosine tetraphosphate biosynthetic processInterproscan
GO:0017101Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan
GO:0043032Biological Processpositive regulation of macrophage activationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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