Detailed information of HS02751 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS02751TALINchr456320645690352-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00373FERM_MFERM central domainDomainInterproscan
PF01608I_LWEQI/LWEQ domainFamilyInterproscan
PF08913VBSVinculin Binding SiteDomainInterproscan
PF09141Talin_middleTalin, middle domainDomainInterproscan
PF16511FERM_f0N-terminal or F0 domain of Talin-head FERMDomainInterproscan
PF21692Talin_R4Talin, R4 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000299DomainFERM domainInterproscan
IPR002558DomainI/LWEQ domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR015009DomainVinculin-binding site-containing domainInterproscan
IPR015224DomainTalin, centralInterproscan
IPR019747Conserved_siteFERM conserved siteInterproscan
IPR019748DomainFERM central domainInterproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR032425DomainTalin, N-terminal F0 domainInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR035964Homologous_superfamilyI/LWEQ domain superfamilyInterproscan
IPR036476Homologous_superfamilyTalin, central domain superfamilyInterproscan
IPR036723Homologous_superfamilyAlpha-catenin/vinculin-like superfamilyInterproscan
IPR037438DomainTalin-1/2, rod-segmentInterproscan
IPR049108DomainTalin, R4 domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19981TALINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001726Cellular ComponentruffleInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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