Detailed information of HS02690 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS02690MATRIX METALLOPROTEINASEchr422927632314275-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00045HemopexinHemopexinRepeatInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000562DomainFibronectin type II domainInterproscan
IPR000585DomainHemopexin-like domainInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR021158Binding_sitePeptidase M10A, cysteine switch, zinc binding siteInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001666Biological Processresponse to hypoxiaInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0048771Biological Processtissue remodelingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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