Detailed information of HS02572 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS02572PRE-MRNA CLEAVAGE COMPLEX IIchr32466846124680626-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04818CIDCID domainRepeatInterproscan
PF11526CFIA_Pcf11Pcf11, Clp1-interaction domainDomainInterproscan
PF20827PCF11_chargedPCF11, charged regionDomainInterproscan
PF20845Pcf11_helicalPre-mRNA cleavage complex 2 protein Pcf11, alpha-helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006569DomainCID domainInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR021605DomainPcf11, Clp1-IDInterproscan
IPR045154FamilyProtein PCF11-likeInterproscan
IPR047415DomainPcf11, CID domainInterproscan
IPR048830DomainPre-mRNA cleavage complex 2 protein Pcf11, helical domainInterproscan
IPR048832DomainPCF11, charged regionInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15921PRE-MRNA CLEAVAGE COMPLEX IIInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005849Cellular ComponentmRNA cleavage factor complexInterproscan
GO:0006369Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP