Gene detail

Detailed information of HS02485 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS02485	G-PROTEIN COUPLED RECEPTOR	chr3	22060671	22062321	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS02485

GGCGCCATCCTGAGCATCGCCTCCTGCTTCATCATCTCCACCAACCTGCTGGTGGCGGCCGCTCTACTCAAGCTGGTCCTGAAGAAGAGAAGCCAGAGCTGGTGCTTCGTCCTCAACTTGGCGCTGGCCGACGCCCTGGTGGGCGTGGCCATCACGGGCTTGGCCGCGGAGGACTTCAACAGCAACAACGTCGCTCAGAACCAGCGGAGCCTcgccgccgccgccgccgcagtcgacgccgatccgccgaccaacgccacgccgaccgcTCAGGGCAAGACGCGGTGTTTGATGCGGATGGCCTTCGTGACGTCGCCCTGCACGGCGTCCATCATGTCCATGTTCCTGATCTCGCTCGACCGCTACGCCGCCATCAAGATGCCGCTGCGGTACTCCCAGCTGTCCGGGAAGGTGACCGCGGTCGGGTCCCTGCTGGCTCTGTGGATCAGCGCCCTCACGATGGGGTTCTTGCCAGGTGAGACTCGAGACCCTGCGGGCTCACACAGCATTGGTAGAGACGACCGAAGCCCATGGCctttcagccaggaggctgttgacaacaagtcaacgttaatgtgtatgtcacgtaagttgcatactcaagttaagccacgcccttagttattttaaccGTAACCCCGACACGAAACCAAACGAAATATTTCACGATCaTTTTCTAAACCTAAaTAAGTaTTTTCCGATCTTCTCTAAAACCTAATCAATTAGTTTCGTGAGCCTGAACCTAACAACTTATTCCACGATCTTTTCCAAAACCCTCATTACGTATTTTCACGAtCTTTTCCTTCGTCGTTTCCTGCgAAGGTTTATTTCGCAAATACCGTATTCCAAACCTTAATTGGACACATGAAAACGTACAAGCGACTTAATTCGTTCGATGAACGTTGAGTTAGCATCCGTTCACGCAAAAACACAGACAACTGCTTGAGTATTTAATGGTGTGTTACGGGAAAGGAAGCTGGCAATCAGACAGGAAATGGTACTGAGAGTTGCAACGGCAGAAAAAAGGTAAAGTTTGAGGAATACATCCACGAGTTTGAAGGCTTCTACGCATGTTAGTGGACTTTTGGAGTCCTGGAGTGTCTCGCGTCAAATAACCCATGTCCTCTGTCCTTCAGTCATGGTCCGGCAGCTGCAGGCCGACGGGTACACCGGCTTCTGCGCCTTCTTCTCCGTCATCCACCAGGTGGGCATGATCGTGCTGTTCAGCGCCTGCTTCTTCCCCGTGCTCTCCGTGTTCCTGTACATCTACCTGGACATCCTGAAGATCGCCTGCGGCCACCAGAAGCAAATCTGCCAGGTCAGGCAAGCCGGTTCCAGGACGGATAGccatcaacactacgagcaccaccaccgccaccaccagcaccagcaGCTGAGGAGCCATTACTGGAGCCATGTCAAGGCCCTGAGGACGGTGGGGGTGCTGGTGGGCTGCTTCTTGGTCCTGTGGTGCCCCTTCTTCGTGGTGTGCATAGTGCACCTTCTGTGCGAAAGCTGCGAACTCACCAGCGTGTTGGAGAATCACCTGTGGCTGTTGGGGCTGTCCAACTCGCTCATCAACCCCTTGGTGTACGCCTTCTGGCAAAAGGAGGTGCGGCTGCAGTTGGCGGCCATGTTTTTCTGCTTTACAGGCGCCATCCTGAGCATCGCCTCCTGCTTCATCATCTCCACCAACCTGCTGGTGGCGGCCGCTCTACTCAAGCTGGTCCTGAAGAAGAGAAGCCAGAGCTGGTGCTTCGTCCTCAACTTGGCGCTGGCCGACGCCCTGGTGGGCGTGGCCATCACGGGCTTGGCCGCGGAGGACTTCAACAGCAACAACGTCGCTCAGAACCAGCGGAGCCTcgccgccgccgccgccgcagtcgacgccgatccgccgaccaacgccacgccgaccgcTCAGGGCAAGACGCGGTGTTTGATGCGGATGGCCTTCGTGACGTCGCCCTGCACGGCGTCCATCATGTCCATGTTCCTGATCTCGCTCGACCGCTACGCCGCCATCAAGATGCCGCTGCGGTACTCCCAGCTGTCCGGGAAGGTGACCGCGGTCGGGTCCCTGCTGGCTCTGTGGGCCGACGGGTACACCGGCTTCTGCGCCTTCTTCTCCGTCATCCACCAGGTGGGCATGATCGTGCTGTTCAGCGCCTGCTTCTTCCCCGTGCTCTCCGTGTTCCTGTACATCTACCTGGACATCCTGAAGATCGCCTGCGGCCACCAGAAGCAAATCTGCCAGGTCAGGCAAGCCGGTTCCAGGACGGATAGccatcaacactacgagcaccaccaccgccaccaccagcaccagcaGCTGAGGAGCCATTACTGGAGCCATGTCAAGGCCCTGAGGACGGTGGGGGTGCTGGTGGGCTGCTTCTTGGTCCTGTGGTGCCCCTTCTTCGTGGTGTGCATAGTGCACCTTCTGTGCGAAAGCTGCGAACTCACCAGCGTGTTGGAGAATCACCTGTGGCTGTTGGGGCTGTCCAACTCGCTCATCAACCCCTTGGTGTACGCCTTCTGGCAAAAGGAGGTGCGGCTGCAGTTGGCGGCCATGTTTTTCTGCTTTACA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22750	G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0019222	Biological Process	regulation of metabolic process	Interproscan
GO:0031210	Molecular Function	phosphatidylcholine binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-