Gene detail

Detailed information of HS02361 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS02361	SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2	chr3	16027634	16031856	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS02361

TTCCTGAAGTCTGAGGCGGACCTGGAATACATCGAGAGGCGGCTGACGCTGGGCTTCATCAAAAGCGAGACGGGATGTCCCGCCGAGGTGATGACTGAGATGAAGGCTGTTGTTCTACCTACAAATTCATACAACTTGAGGCAAAGCTGCCATACTTTAAATGCAatatatatatatatatattatTGGTGGCAGTATTTTGACGTCCACTATAAACACAGTTCACCAAGTTATTCTCCATCATGTTTTCTCCTAATAatatacagtgcatccggaaagtattcacagtgcttcattttttccacattttgttatgttacagccttattccaaaatggattaaattcattattttcctcaacattctacacacaaaaacccataatgacaaagtgaaaactgttttttgcaaatttttgcacatttattaataataaagaacgaaaacataacatgtacataagtattcacagcctttgctcaatactttgttgaagcacctttggcagcaattacagcctcaagtcttcttgggtatgattccacaagcgtggcacacctatttctgggcagtttatcccattcttctttgcagaacctctcaagttccatcaggttggatggggagcgtcggtgcacagccattttcagatctctccagagatgttcaatcgggttcaagtcagggctctggctgggccactccaggaccttcacagagtcgtcccgaagccactcctttgttatcttggctgtgtgcttcgggtcgttgtcctgttggaagatgaaccgtcgacccagtctgaggtccagagcgctttggagcatgttttcatcgaggatgtctctgtacattggtgcattcatctttccctcaatcctgactagtctcccagttcctcccgctgaaaaacatccccacagcatgatgctgccaccaccatgcttcactgtagggatgggattggccaggtgatgagcagtgcctggtttcctccagacatgacgcttggcattcaggccaaagagttcaatctttgtttcatcagaccagagaattttgtttctcatggtctgagagtccttcaggtgcttttttgcaaactctaggcgggctgtcatgtgctttttactgaggagtggcttccgtctggccactctaccaaacaggcctgatttgtggagtgctgcagagatggttttccttctggaaggttctcctctcttcatagaacaacgctggagctctgtcagagtgaccatcgggttcctggtcacctccctgactaaggcccttctcccccgatcgctcagtctggctgggcgactctaggaagagtcctggtggttccaaacttcttccatttccggatgatggaggccactgtgctcattgggactttcaatgctgcagaaatctttctgtacccttcaccagatctgtgcctcgatacaattctgtctcggaggtctatagataattccttgaacttcatggcttggtttatgctctgatatgcactgtcaactgtgataccttctatagacaggtgtgtgcctttctcaatcatgtccaatcaactgaatttagcacaggtggactccaatcaaacatctcaaggatgatcagtggaaacaggatgcacctgagctaaatgttgagtgtcatggcaaaggctgtgaatacttatgtacatgttatgttttcgttctttatttttaacagatttgcagaaaacagttttcactttgtcattatgggttgttgtgtgtagaatgttgaggaaaataatgaatttaatccattttggaataaggctgtaacataacaaaatgtggaaaaagtgaagcgctgtgaatactttccggatgcactgtataGatatatatatatatatataACAAATGTAATTGTACATGTTTTTTATGCTTCAGGAGACATAATGCAACACAAGAAGAAGAAAAAACATGATAGTCAATTAATGGAGAACGGGTAACGGAACCAAACAAACCAGGGCAGAGAGAAGCTAATATCAGTCAAATAATATGTGTAGAGCAATAAATGGAGAAGAGCACAACATTCAAATAGATATACAACATGTATATGGCACAGCACATTTTCATAATAGAACCGGTAGGAATATTTTGTTCCGGTTATGCGTGTATTTTTGTATCCGTTAAAAAGGTATCGGACCAAACTGCATAAATCCTCCTTGGTCATAATAAGTTCCTGAGATCAGAGATTCCAAAAGTCGTTCATTTGAGCTTTGTCCGGAGGACAATTATTGAAGCTCCTAATGAGACACAACTGGGGAGATCCTGGCTCTGTTTTACAGTCGCTCTCCAATATTCAGTCAAATAGCAAGACTCCCACATTGAGTGAGGAATATTCCTTCACACTTGAGTCCGAACTGACCGACACTGTGCCCGCAGGAGAACCCGGCGGTGATGCTGGAGAACCTGAGGGCCATCAAGGCCAAGCACGTGGCGCTGTGCTCGCAGGTGAAGGAGATCGCGGCGGCGCAGAAGGAATCCATGGACTCCATCCGGCACAACCTGGGCGGCGCCATGGAGCTCGTGCAGCGCTTCCAGCAGAACACTGACCTGCAGGTACCCGCTATGAAACGCTTCATGTTCTACAGACTGTGGAAAGTATCTGCTCTTGAAGCCACGGTCCAAATTCTGTCTCAGAAGAACATTACATAACGATCGTAAAATACAATAAGTTTGACTTGGCAGGAAAAAAAGCAGAAAAAAACATGCTTATATTGTATTATACATGTAAAATATGTTGCTTCTCTATGTATAAACTGTGTCCTCGTCAACTCGCTGCAGGTTCAGTCACTGACGGAGTCCGAGCGGGAGTCAGCAGAGCTCCTGGGTTTAGCGGTCAGTGAGACCACAACAGAGGTGAGTCAGCTCCCAGAAGTCTGTTTGTTGCTAACCTGTGTCACTAACGCACACCAGTAAACTGCACCGTGTAGATCCTCGATGTAGGGCTTCCAATATGCTCATATTCAGTAAAGCTGAACTGTTTTTATGCTTCACTCGGGATGATTTGTTCATCTTAAGCGGAGACGTGTATAACAAAGTAGGTATTGCAGTGGACTTTGTTTACCTTGTTTTTAAACTCCTTTTTATCCCCTGACTCTCGCAGCCTTGAGAAGCATCCTGCTGCTTTTCTCAGGTAGTCAGGAAGTTTCCCCTTTATGGGCTGGAGGATTACGAATACGTCTTTCTTGAAGCCCTCTATGATTTCGTGACAATTTAATGAGCCAACTTGTAGACTATTGTAAAGTCTTCTGTTGTTCAAAGGCCTTCATTTTCCCTTTTTTCTCGTagACTTTTATTTTGAAACCTCTGTCCTGGAACACCAAACATAGCCGTGCCCCTCACtactattattattattaatattTAATATGACTCCGCCATGGGTTTGAATACCAGCTTTTATTCTATACCCGTTGTAAATGTAAATCATATCTTTTGTCATGTTGGATTTGACTCATGAAGTCAGTATTATAAGGTGTCAGCACATGTGCTAACCATGCGTGTCATGTGGGTCAATCGGCCGCCTCGAGCTACAATCCGGACAAGAGTGAATATCACGTCCAGGTCACTTGATGATTTCTGCTGCTGTTGGTTTTCTTTCAGGTTCCTACTCTTGGAGCAGCTTCTGGACACCAGCAGCCACCGAGTGAGTCTGGCACTTCCAGGTCTCGTACCCTGCTCTGAACACTAGCGTAGTCCAGACTGtattggactcgatatggggaccatcatttactaaattaacatcatgctgtagtgaagatttcaaactagagattgagaacataagctcatgttgactgagggaataaatcaagagagaagtagtcattttctcatagacttctatacaaccagaggagtcgcaccctgatggacattagagaCTTAAAATCACTTCGACTCAAAATGTTTGACAAATAAATCCAGAGTCCAGGTGAACAACCCTTTTTAATGTCAGTTCAGACCAGTTGGAATGTCCCTCTGCAGTTTCGACACTCCTCCATCAGGTGACGGCGGTCGTCTTTGAGACTGACGCAACTGTCCGTCCGTCCACAGACTGCGGGTACGAGGAGGTGAGCGACGCCATGCTGGAGGAAGTTCCTCTGGACGTGCGCTCCAGCGTCAAGCTGGCTGACCTCAATATGTTCTACCAGCACCTGCAGTAGTTCCTGAAGTCTGAGGCGGACCTGGAATACATCGAGAGGCGGCTGACGCTGGGCTTCATCAAAAGCGAGACGGGATGTCCCGCCGAGGAGAACCCGGCGGTGATGCTGGAGAACCTGAGGGCCATCAAGGCCAAGCACGTGGCGCTGTGCTCGCAGGTGAAGGAGATCGCGGCGGCGCAGAAGGAATCCATGGACTCCATCCGGCACAACCTGGGCGGCGCCATGGAGCTCGTGCAGCGCTTCCAGCAGAACACTGACCTGCAGGTTCAGTCACTGACGGAGTCCGAGCGGGAGTCAGCAGAGCTCCTGGGTTTAGCGGTCAGTGAGACCACAACAGAGGTTCCTACTCTTGGAGCAGCTTCTGGACACCAGCAGCCACCGATTTCGACACTCCTCCATCAGGTGACGGCGGTCGTCTTTGAGACTGACGCAACTGTCCGTCCGTCCACAGACTGCGGGTACGAGGAGGTGAGCGACGCCATGCTGGAGGAAGTTCCTCTGGACGTGCGCTCCAGCGTCAAGCTGGCTGACCTCAATATGTTCTACCAGCACCTGCAGTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16740	SKA2	Spindle and kinetochore-associated protein 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026762	Family	Spindle and kinetochore-associated protein 2	Interproscan
IPR042091	Domain	Ska2, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32017	SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000278	Biological Process	mitotic cell cycle	Interproscan
GO:0000940	Cellular Component	outer kinetochore	Interproscan
GO:0005876	Cellular Component	spindle microtubule	Interproscan
GO:0007059	Biological Process	chromosome segregation	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0051301	Biological Process	cell division	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-