Detailed information of HS01262 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS01262HELICASE WITH DEATH DOMAIN-RELATEDchr21086942110923837+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF16739CARD_2Caspase recruitment domainDomainInterproscan
PF18119RIG-I_CRIG-I receptor C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001315DomainCARD domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031964DomainCaspase recruitment domainInterproscan
IPR041204DomainRIG-I-like receptor, C-terminalInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0039528Biological Processcytoplasmic pattern recognition receptor signaling pathwayInterproscan
GO:0039530Biological ProcessMDA-5 signaling pathwayInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0140374Biological Processantiviral innate immune responseInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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