Detailed information of HS01032 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS01032E3 UBIQUITIN-PROTEIN LIGASE TRIMchr260733236074522-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR050143FamilyTripartite motif-containingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24103E3 UBIQUITIN-PROTEIN LIGASE TRIMInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016239Biological Processpositive regulation of macroautophagyInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0043123Biological Processpositive regulation of canonical NF-kappaB signal transductionInterproscan
GO:0045087Biological Processinnate immune responseInterproscan
GO:0051092Biological Processpositive regulation of NF-kappaB transcription factor activityInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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