Gene detail

Detailed information of HS00682 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS00682	MYRISTOYLATED ALANINE-RICH C-KINASE SUBSTRATE MARCKS	chr1	17974561	17976256	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS00682

ATGGGATCCCAGGCATCCAAGGGAGACGTGGCCGCGGAGGCGAACGCCGCCACCGCTGATGCTGCAGCTGTCAAAACCAACGGACAGGTAAATTACCCGCGACTCTTTGCGCTCGGTTAAAAAAATTCAAAATGTCATTTTTATGAATGGGAATAAGCACGCGCGGATACGAGTTTGATATTCTCACACGAAAAACGTGAGTTTAATACATTTTAGTCGACGCCGAACCCATACAACGTGAATGTGAGGATTTATTTTTTTTGGTAGGGGGGGAGGGGAAGGAGGGGCAAGCCAGGTGGGGCTtttttttccttccttctttctttctttTAACAGTCGCTGTCTCGCGCAGACCGACTTCCAAAAAAACGGCTCCCAATTTTAAAAAATAAATAAAACTGTTGTTATTTTTATCTCGGTGGAGATGAAGAACGCTTAGTGTTAAATTTTGTGACCGAGCTCGAACCCCCCCCCAAACGATCAATGTGTGTGATGGTGCCATGGCATTAAagggggagggggaggaggggggcagcgcgagCGCACGTAGGCACTCCTCCCTGTTTAAAGCGCGAGCCCGGCTGTTGTCTGGGCAACGGTTGTCCGTTTTTATTCTGTCATACATGTGATACTGTAAACCACCATCATTATGAATGTTTAATATTACTCATTATATATATTTTATTATGATTTACTCTTAACTTTTATCAATCGAGCAGTATTTATTTCAAGCTCATTATTTGGGGTGAATTAAAACGTGATTATTTTGGGGGGGATGTGAGCGGATGAGCCCCGGTCTTGTCTTTTGTTGAGCCGCCGTCTGTCTGGTCCCTCCGGCCGGTCAGCGAGGCGCCACCGCCGCCTATCGCTCGCTTCCGGTACTGCAAGGCGTCGCCTCCGAGCCCGGCGACACGTGGTTAATTGATGAGCACGACGACAAGAAACGACAAATGCGCCTCTAAAATAGCTAATTTTAGTTGTTCATGCATGTGCAGAGAGGTTTAAGAAAGAAAAGAAAAAATGATTTATATATGAATATATATATTTTCTGTCTGATTACTTATTCCGTCAACCTCTTGTGTCTCAGGAGAACGGACACGTGAAGACAAACGGCGACATCTCCGCGAAGCCCGACGGGGACACCGCCGCCACCAACGGCTCGGCCGACGCGGCCAAGGAGCCCAAAGCCGCCGCCGGAGGGGACGCCATCGAGCCGGCGCCCGCCGCGGACGGCGAGGCGGCGAAGACCGAGGGCGGCGACGCCGCGACCAAGGAGACCCCCaagaagaagaagaagaagTTCTTCCTGAAGAAGTCCTTCAACTTCAAACTGAACCTGAAGAAGACCAAGAAGAGCGAGGCGGTCAAGGAGGAGGAGGCGCCCGCCGCCGAGGAGAAGCCCGCCGAGAACGGAGCCGCCGCTCCggcggaggagaagaaggacgagaagaaggacgagaagaaggacgagaagaaggacgaggagaaggacgaggagaaggaggaggagaagaaggaggagaagaaagaggagaagaaagaagaggcgaaagaggaggCTGCCGCCGAGGCCCCGAAGGCAGAGGAGGCGCCCGCCAAAGAGGAGGCGCCCAAGGAGGCGGCTGCCCCGACCCCCGAGGCCACGAAACCGACGGAGGAGAGCAGCTCGACCCCGGCTCCCTCTGAAAAGAAGGAGATGGGATCCCAGGCATCCAAGGGAGACGTGGCCGCGGAGGCGAACGCCGCCACCGCTGATGCTGCAGCTGTCAAAACCAACGGACAGGAGAACGGACACGTGAAGACAAACGGCGACATCTCCGCGAAGCCCGACGGGGACACCGCCGCCACCAACGGCTCGGCCGACGCGGCCAAGGAGCCCAAAGCCGCCGCCGGAGGGGACGCCATCGAGCCGGCGCCCGCCGCGGACGGCGAGGCGGCGAAGACCGAGGGCGGCGACGCCGCGACCAAGGAGACCCCCaagaagaagaagaagaagTTCTTCCTGAAGAAGTCCTTCAACTTCAAACTGAACCTGAAGAAGACCAAGAAGAGCGAGGCGGTCAAGGAGGAGGAGGCGCCCGCCGCCGAGGAGAAGCCCGCCGAGAACGGAGCCGCCGCTCCggcggaggagaagaaggacgagaagaaggacgagaagaaggacgagaagaaggacgaggagaaggacgaggagaaggaggaggagaagaaggaggagaagaaagaggagaagaaagaagaggcgaaagaggaggCTGCCGCCGAGGCCCCGAAGGCAGAGGAGGCGCCCGCCAAAGAGGAGGCGCCCAAGGAGGCGGCTGCCCCGACCCCCGAGGCCACGAAACCGACGGAGGAGAGCAGCTCGACCCCGGCTCCCTCTGAAAAGAAGGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02063	MARCKS	MARCKS family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002101	Family	Myristoylated alanine-rich C-kinase substrate MARCKS	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14353	MYRISTOYLATED ALANINE-RICH C-KINASE SUBSTRATE MARCKS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0007417	Biological Process	central nervous system development	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-