Gene detail

Detailed information of HS00446 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS00446	PROTEIN ENHANCER OF SEVENLESS 2B	chr1	11125763	11128827	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS00446

ATGGGGAATATCATGCGAGGCGTGAGTTCCACGGGCAAAGTCAACACAGACAGCTCTTTAAAAGGTAAGATCTCCCCAAGTTTCTTTTTCAAAAAACATCATATTATTTTCCATAGTGCATAGTGGAATATAATATAATATCTCAGCAATGTTGAGAATAGTGGTGAGATATCATGGTCTTAATAAAAAACATTATTTCAAACTAAAAATAGAAAGAAATGAATTGGAAGTTTGGTCTTCGACATCTTTGGACTTTATCAATTCATGATGTCTGTGCATCAGCATGTGGCTGAAGGTTATAATGATTGTGCCTGACAGGTTCAGAGGATGACATGGTGGTGGTGCTTCAGGACTACCCGTTGCCTGAAATCAGCGAGCCCATCTACAGGACCGGGGAGAAGCTCAGGCTCATCGCTCAGTACGATCATGTTTTGACATTCTTGATAAAAAAAAAAAAATCCCATCCAGATGTACATTTGGCACATGGAAGACCTCAAACAACTACAGGGGAAATAAATCTAATTTAAACTTGATGCTCTGAGTTTGTTGCAGAATGGAGAAGTGTTCACACAGAAGGGTCAGTTGTTTAATTCCTCTTTTCTTTTTTATGGTGGTTAGGGAGGCTTATTGGTGGAGAGTACGCTCTGTACAAACACAAAAGGATAACTACATACCTAACAGCCATGTGGCAAAGGTGTACCATGGGTAAGTACAAATATACTGACAGTATTCTCTCAAATCAGCCTTGTTGATCTCTTTGAATTTGCTTCAGATTGATAACAGCAAAATACCAAAGACATCTTTTTCCACTACAATAATCTAAGATCTCATGAAGCGGGAGATATTAGTAACTCCAGATGGTTGTTCGTGTAGATTTGAAGGCTTAGTCATTAATAATAACAATATTTAACTGCTTAGGTGTAAAATGTGCATGTGATGTGATCTTTAACTCGTGAATTGTTTTTGTTTGGTCAGCTGGCTGTTTGAGGGCATCGAGAGGCAGAAGGCTGAAGAGCTGCTGGCTCTCCCTGGGAACAGAGTGGGCTCCTTCCTGGTGCGGGAGAGTGCCAGGGAGAGAGGTGGGTACAGCAGAGTCCGCCATCAGACCTGTTGCTATGGTTTCAAGAGTCAAGAAAATGGTATTCACTGGAATTTCCACCTGAATACATACATTCATATTAGATTAGATTAGATCACAGCAGCGATCCTTACATTCTAAGGATATCTGAGGATTTTGCATTGAAAATGTTTCAATATTATTGCCGTAATTTAATACAGTTGAGATATTATCACAATGGAAAACATTTACAGAATTTACTTGCTCGAACCCCATCATTTTTTCTTGAGTTCTGGCGAAATTGCATTGACCTGATATCATTTTGTGTTTTCTAAAACAGACTAACTTGGTCATGATTGAGATATTGTTGTTAAGCGCATGGTTTGTGTCCTACCCTCAGGTCTGTATTCGCTCTCGGTGAAGCACAGGATCGTAAAGCACTATCGTATCTTCAGACTGGACAACAGCTGGTACTACATCTCCCCTCGCCTCACTTTCCAGTGCCTTGAAGATATGATCAACCACTACTGTGGTGAGTGGATGCACCATCATGGAGATAAATAACTAAACAGCTCTAAACGCAACAAAAAGGAGACAAGCACCACAACATGTTGAGCCATACAAACACACAAACAGTCAATGACACGCACTTGAGCACTGACAAATTCACCATGTTCTTAATTTAGCACTCTTTCTTATCAGCGACGTTTCACATATTTCCTGCTCTCACAGGAGATTTTTGGGACCAAAACAGaAAATGAGATGCTTTATAATGACTAGTCTTGCTTAATGAGAGAACATTGTTATCGTTATGTGTTGTAATCGTGAACCTATTCTGAATCAATGTGGATGTTTGGTTTGTGTTTTTAGCTGAGCAGTAGAGTGTGAAGGTAGTGACGGCCAATGATGCCAAATAAGTTCTGTTTGTTTGTCAGCGTGTGAGCAGTGTTTTACTTCCTCTATCCTTGCCTTTTTCAGACTTCGCGGACGGCCTGTGTTGTGCATTAACCTCCCCGTGTCTGTCAGGAATGACCCCGCCATCAGATTCATCCCCTGGAGCTCCACCTGTCGTCATGCGACGAAACTTTGATTGGAAAAAGATCGACAGGTACATTAGACGCTTTGGGATGATATGCACCAGCTTTAATCTGTCAGCATGACATAATCCTGTCAGGTGGTGAGTCCAAAGAACAAAGATGCTATAGTGAGTTAtcttatttatttattttgcacaattcaaacaataaaacaaaataaaaatcacaacagagataaataaatatctcagtgcaggaagagacaaaaagccaactaagcttatttgaagcctccacaaatataatatttaacatttgaaaaaattacaaagataaaatggaaaatgcatTACATTCTCTTCTTCTTACCTTCAAATAATTTATCCAATAATAATCAATGAATTGTTTTGCATATTAAATGGTGCATAACTGTGACCATGAACCATTACAAGATGACTTTTTATGAATGGCTTGTTTTGTCAAACCAACAATAAAGCAGAAGAAAAGCGGAACCAGCTGTGTTTGGCATTTTCTCTTGAAAGATGTCTGAAACAATTAAGCAATGATCAAAATATATGTTCTTTCAAATGGCTAATTGATTGATGAACTACTCGTTATTGAATACAGATATTCGAGTAGATTGGTGGTGGATGGATTTGGAAACCCACGAGACGATACACATTTTTTTCATAATTTGTTCACAAGTGAACAAGAACATTTAGACATGAAGCTGCTATGTTGTCATGCATTTGTTCATCTCCTCTCTTAACAGGAGACAGCTGGTCAGCACAGACAGCCACAGTGACAACATGGTGAGCTACGGAGTCAGAAACAGTATCGCCGCCTACTTGTCCTTTTCTGGGAATCAGAACTATGAGCAGACGAGAGCAGAAAGCAGGAAGAAAAAGAGTAAATCTGTTTATGCGCTCCCTGAAAATGGCCTTGGAAACATTGACTATGAAGAGGATTTCATGGGGAATATCATGCGAGGCGTGAGTTCCACGGGCAAAGTCAACACAGACAGCTCTTTAAAAGGTTCAGAGGATGACATGGTGGTGGTGCTTCAGGACTACCCGTTGCCTGAAATCAGCGAGCCCATCTACAGGACCGGGGAGAAGCTCAGGCTCATCGCTCAGGAGGCTTATTGGTGGAGAGTACGCTCTGTACAAACACAAAAGGATAACTACATACCTAACAGCCATGTGGCAAAGGTGTACCATGGCTGGCTGTTTGAGGGCATCGAGAGGCAGAAGGCTGAAGAGCTGCTGGCTCTCCCTGGGAACAGAGTGGGCTCCTTCCTGGTGCGGGAGAGTGCCAGGGAGAGAGGTCTGTATTCGCTCTCGGTGAAGCACAGGATCGTAAAGCACTATCGTATCTTCAGACTGGACAACAGCTGGTACTACATCTCCCCTCGCCTCACTTTCCAGTGCCTTGAAGATATGATCAACCACTACTGTGACTTCGCGGACGGCCTGTGTTGTGCATTAACCTCCCCGTGTCTGTCAGGAATGACCCCGCCATCAGATTCATCCCCTGGAGCTCCACCTGTCGTCATGCGACGAAACTTTGATTGGAAAAAGATCGACAGGAGACAGCTGGTCAGCACAGACAGCCACAGTGACAACATGGTGAGCTACGGAGTCAGAAACAGTATCGCCGCCTACTTGTCCTTTTCTGGGAATCAGAACTATGAGCAGACGAGAGCAGAAAGCAGGAAGAAAAAGAGTAAATCTGTTTATGCGCTCCCTGAAAATGGCCTTGGAAACATTGACTATGAAGAGGATTTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980	Domain	SH2 domain	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR043539	Family	Grb2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46037	PROTEIN ENHANCER OF SEVENLESS 2B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001784	Molecular Function	phosphotyrosine residue binding	Interproscan
GO:0005154	Molecular Function	epidermal growth factor receptor binding	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0008180	Cellular Component	COP9 signalosome	Interproscan
GO:0043408	Biological Process	regulation of MAPK cascade	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-