Gene detail

Detailed information of HS00424 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS00424	P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN	chr1	10587335	10594513	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS00424

ATGGCAAGCTTTACCTGCCAGGCTAACGGAGAAAACGCACtGGGTCGAAGCTCCGATTCTGACATGTCCCGTCGACACCGGTACGAGTCCGAGTCCGACGTCGGCCTGACTGTCAAATGCTTAGCGCGGCTGTGCAGCAGGGACGAAGAGGAGCGAGCAGCGGCTCTGGAGGAGCTCAGTCAAGAGGTCCTGGCGTGTCTGGGACCGGATCGGCGCGGTTCGGCCCAGCTCAGTAGGCAAACACTTTTACATCTGCTTCGGCTGTCCCGGTCGTGTCCGCTGCAGGAGGTTCGGGGGAGAGCAACCGAGCTGCTGCGAACCGCACAGGTAATATTGGGACGGTGCTTATTATAACGTCTGCAGACCGGAGGGGAACTCTGATTGCGCAACAATGTCGATAGGCAGGAGTTTGTTTTATTTTGGCACTCATGTTATTGGTTTAGCTGCTTATCATCATATTCCAAGAGCAACAAATGAATGATTTATTAACAGTCACGATAACGTTGAAGCTGATCAGTTATCAGCTGATTACCACTTTCTATCATAcTATTTCATCAGTAGTTGAACCGCACGAGGTGACGCAACACTCCGCTGTGGTGTGCACACACGAGCGGGCCGGACACGCCCCCTCCCGGTACCCTGAGTAACACCCCGAGCATCAGCTCGCTGCAGATCCCAGGAATATAGAGTAaAGCTGGGTTGGCCACATGTTCAGCTTATCTGTTGTCTCTTTTCGAGAAAACAAGGGGGACGTTGTGCCTTCTGATGACGTCTGTGAGTTGAATGCATGCTACAGATTTCATAGGCTGCGAGTTATGAAACAGGCTCCAGTTACAGAACAGCTGCTACAGTCGAAGTAAAGTCCAGTCAAATTCAAGGGGGTTGGGGGGATTTATCTTCAAATAACGTTTTCATCGATAACATcACCATTATTTATATATTCTGAAGAATTTAAGAAGATATACTGTTGATGTATgGGCAATCGTATTCTAGTAGTTTGCTCAATACATAATTAATGTTTCCATTTATTTTGTTAACTATGTGAAGCTGAAATAAGTCAATTCATCAGTGTGTCAATCGGCAGAGGACAAAATAAATAAATCAGCAATCGCTTGGATGATTTTATCATTTGAGTTTTCAAGCAGAAATGCCGAACACTTCCTAATTTCAGTTTCTCAGTTGTGAAACTGCTGCTTTTCTTTGTCTTGTGTCATTGTGGGCGCAATAGCTTTCCTCATCATAGCTCATTGTTCAGACAAAACGAGTACTTTGATGACATTATCTTGGGTTTTGGAAAACTACAACAAGCTGTCTATAATAGTTTCAGACATTTGATATAGTAGATCAAATGATTTATTGAGAAGATGGTTTTAAGATTATTCAGAAATGAAATTAGATATCAATTCACTGTGcAATTTACCTAACTCTGTGTCTTCCTGCTTTAGGAAAAAGGAGTTGAAGTCCCCCGGGTGCTGGCAtCAGGCCCAAGTGCCTTTATTCCTGCAAAAGAGGTGTGTATGGCTTAGATATAAAAGAACATCCATTTACCCCATTATTAAAGATATCAACTTCAAAATTGTTTTCCATGTTTGTAAATTGTTGTGATAGTGTGAAATCACAACATAATTTCAGTGTTCTTCTCCAATAATCCCATTACGCAGTGTTTCATGTTGATTATAATTTTTCTTATTTACCATATAATGTTTTCGTTCATACTATTTATATAAGGGATGTAGTTTCCAGgGTGCTACAGAGCtTCCATGTCTTATCCAAAGACTTCACGTTgTCAAGAGAAGCAATAGCACACATGTTACAAACgCTGAGGACTCAAAATGCTACTTTATTATGTGACTCACTCCAAGTTTTCCACTTGAGAAAGAATGTTGTAGCAGCTTTTAAAGGCTGTTTGTTTCCATGTGCAAGTGAAACAATTTAAAGCGACTCCTTGGCAAAGTGTCCTCAAGCATTGTAAAAATATAAACTGAGTTCAGTTGTCAATTTTAAACATGTATTTTGTTTTGCTCTTTCTCTTTAGATGTTGAAAGAAGTGCCGGACCAGGACATCCTCATCGAATCGTTCCTTTCATTGGGCCGCGTGGACCACACCACCATGGTGATGGCAATGCACCCTGCCTACCTCAGCTGCTTCCTGAGGACCCAACATGCTCTGCTGGAGATGGACGGCCCCTTGCCCCGTCACTGGATACATTACATTGTTGTTATGGTAAGTTCATCACAGTATAACTAGTCTCAGCTTTTAGAGCTTTCAGATCAATGCCAGTGACTGCATTAcGGTCTTCATGTACTCTcCTGCATGTACCTATAGCTTGAACAGATACAATAAAAAGCGCTACAGATAAAGATCCGCAAAATGCTTGCATCATATCAGACAGAATTGTCATCTCGTTaCATGCGGCTCACACTCGGTGGATTTAAAGGTCTGGACCCAGACAAGAAAAACGCTGGCGACTTTTTTGCAATCAACTGAATATAAAGTGGAGTCTGCAGTTTCCTGCAGGGACAATGTGTCTGTTGTCATCGGCATCAGCTTGAGAAGTTCATGTTGTTTGATATCTTACTCAAGTTTCTCGGTTGTCCTTCTACCAAGAAATGGatatcaaaatacaaatatatttttctatatatatatatatatGCACAATGCAGCAAAATGGAATAAATAGTAATAAAACAAATTTGTAGGAGTTGTGCATTTTAAAATGTCAGGACCTTATCCAACAGAGAATTTCAGTTAAGACACAATTGTTTGTTCTTTGCCATATTTTAAGACTCTTAGTGAAAATACTGAGCTTGGCAAAATCTCTGATATTAGTATCTGGGGAGTTTCATTTTATAAGTGCATGAATGAAGGGAAAGTGGTCATAACATGTCTTTCTAAATGTCAATTAGATCAAATTAAATCCTACATATTGATTCACTGATTGGTTCATTGTTCTGCACGGTTgCTCTGCTCGTCTCTTAATTTTTTCCTCATAAGTTGCTCCCACATAACataAAtAcAAATATAATGTTAATTGTTAGTGTTATTATTCCTTTTAAAAGTAAACCATtTGATCTACTCTAGACCTAAATATgCACAATCAACATTTTTGGACTAAGTAAATACAAATGAATCCAAGTAATATTACTACaCATTAAACTTTTCCCTTTAAGCAGATGATATTATTGTTGGTTAGATTTTCCATCATGGTGGATTTAAATCCTGCAAGCTGCAAATCATAACCcAAAACATGTTAACGTTGTTCTGATCTATATTCATCGGCTATGAGCAGACATTTTAGTGCTACTGGCCATGTGTTAGTCTTGTATTTATTCTATATTAATTTATTCTATGCCAAATGAGGCAGCTATGAAAACAGAAATACATTCTCTAACGTCTGTAATTGGGTGCAGAGAGTATCCGTTTATTGTTTAGAGAGATATTGCTCGACTAACGGCTTAGACATTCAAAATCAAACTCCCCCGCTATTATTTGTTCTTTTTTTGACCAAGTCAAGTGTGCAAAATTGTTTTTATGATTTTGTTCTTTTATCTTAAAGTAATTCTGATTTAATTcGTATTATACTAATATTGCTGTAATTCTGTTTCCACTTCCACAGTGAGTGACCAGTGAAGTTATGTTTTCACACCGAGTCATGTGCTGACCTTTTAGTGAAGTGATATGACTACACTTCTGCTTTCCTACACTTCCAACAGAAGTGTGGAAACAGCTGCAGCAGATACAATGGATATAAGTTTGAGTTGTGTGTGCCAGTAGCAGTCGTCTGACTCACCGCaTGGAGACTGTGAACCGAAAGTTGAACCAGATGTTTATAAGTGACGTCTGCTCGATGTTCCATACAGGTTATTGCCTCATTAACGTGTCTGTGCTCATTACATTAATGTCGGAGATTGAGATCTCTGAAAACTGACTGATTGTAGAGTTGTAGATGCATTTCAAGATACTGCAGTGGTTTAAGTTAACCATCGCACACAAACACACAATTTAAAAGCAGCAGAATAGTCAGGAGACAAAATAAATCAGGATAAGTTGGATGATCTTTTCCAAAGAGGAAGATGACAGATGCTAAATGGACTTGGCAGGTAACTTCCCTGCTTGAGGGTTTTTCAGCTCCTGTATCCTAGTGAGCCACTAACGGTCTGCCAAAGACTGAACTCACATACACATTTAATGACGCTCATCGCTCAGAGATTCATCACATTAGCTTCCCTTTCACTTCAGGCATGCCATGTCATGAGACTCAAAATGATCTATTTGTGGAGAAATATATTTGTGTTGCTTTAACCTCTGAGCCCTTATTTTTATATTTATGAGCATGGGCAGTTCTTATGCATTTTGACACCGGTATACACAGAGCAGTGATGAAGCTTTGCTTCTCATGGATGGGGTGATTATGTTTCTCAGGCTGCGGCTCGACATCACTGCTCGTACCTGGTGCAGCAGCACAGCGCCGGCTTCCTAGACGCTGGAGGGGAGGAGAGCTGGCTGAGCGGCCTCAAGCACGCTCCCACCAAACTCCAGAGCCTGCAAACCCTCAACAAACTGCTGGCACACAGACCCTGGCTCATCACGCAGCAGCACATCCAGGTCACACAACACTCACTTCAACGTTTCTTCATTGTGCAGAAATGTCGCAGCCAAGACTCTTAGAAAACAGGTTTAGCCTCCTCCGTATTCGGTGGTCTGAACTAAACCACAGGAAGAGaTTCTGCGCTCAATGTAAAAAAAAAAAAATCTAATTTAATCACATTTACTGAAAAAAATCTAATTGTAAATCTAACTCTTGTCACTTTCTTGGAATGAATCCAATTCCCAAGGTCTCACTAGTTTCGAGGGCTGTATATCTACACtctctttacagagtcgccatgttgcgccgccgtgtctccacagtagccTGCCGTCTTTCTCAGTCACGCTTGTGAAACTGTGGTAACGTGAGCTGTAGAGCACAACACTGGCGCCACCGCCTGGTTTCcatgctaacagtgtggcactaaacgcaaagtgcagctgaggctgacacgaatgtccttttagttgttcacgtatttctttgtgaaccaaagtatgagagaaatcacattttGCAAGCACATTTAAATAACCCCTCACTTCCTGAACACTTGCTCCTCTCCCCATCAGGAGCTGGTGTGTCCCGGAGCGGAGCCTCGCTGGTCACTGGCTGAACTCATACACGCTGTGATCCTGATGGCACACGCTCACTCACTCTGCTCTTTTGGGTGGGGATGCGGCTTGAACCCTGAACCCGACCACATCGGAGGTTATACGTTCCAACTACCATCACCCAATCACCTTCCTCCGAGCCCCCACAGCCCTCAAAGCCCTCGGAGCCCCGCTCACGAGGATAGCAGGCCGGAGGTGAGTCGAGCAGCCATTTCATACCACAGGTCTTGCGTCGGTTTTGTCACGGCAGAAGATCATCACATATTGGTGATGTGCTCGTCTCTACTCCAGCTGGGTGACGGGGCAATGGAGGTGGAGGTGTTGATGCAGAGGATGGTGGCGCTGCAGCAGCAGGAGGAAGAGTGCACACAGGAGGAGATGGTCACTCGCTTTGAAAGGGAGAGGAGCGAGAGCATACCAACCAGTAAATACATGTTCGTGCCAAGCGTCGTCCACAGTGTTTGATGCGTGGTCGCTCACTTTGTCCTTCTTTGTGGTGTTTGTCCAGCGGTCGTGCGAGAAGCACCACCCGATCTGGTGCTGCATCTAGTGGAGGAGCCACAGTTCAGGTACGAGGACTTTGCCCCGAGAGGAGAGCAGTCGCCACCCACCATGAGAGCTCAGGTACTCGGATACATTCCCAATGTGCCTCTTGAGTGTTTGTGCGAAGCTGCACAGACGTGTGTCACTTGATGTCGGTGTCGAATGTGTGCAGGACTACTCCTGGGAGGACCACGGCTTCTCTCTGGTCAACAGACTACTGCCAGACATGGGCCAGCTCCTGGATGAGAAGTTCCAGGTACCCTCACCTTTGACCTCGTAGAAGTTACGGTTACGATCGGCGTTCATTCCACGGACTGGGCTGGAGTCAAAGTGATTCATCATTACGCCGCGGTGGACACGCCAATGTGTGCTCCTTCTCCGgGGCTTTCTTTGTCTTCGTATCGAGGGCCACAAAAGAGTAGAAGACGGTTGTCTACATCCTTCAAGGATCAGCAAAGAGATCAGCAGCACACACGAGCAAATTAATATCACCAAATGATGTAGAATGTGGGGAAAAACAAAACAAATCAACCAGAATTTTGGGGCCATCATCAAATAACAGGCCGGAGTTGTTTTAATTGTATTAGTTGATACAATTGTGCTGGTAAACTCGGAATTTATTTATTAGGACATCCCTAAATAACGTTAAAATGATATATAAATGTTATTTATATTTGATTGATGTCTGGGTATAACACAGTTTGGATATCATGAGGTTCCGACCTTTGCTGGGAGGAGATTTCCTAAACTGGACCTCTTTGAATTTTTATTGAATACCCATCGTTATATTGATTAATATCAGATTGATTGAGATCTACCAATATTGTTGCAGGTTGTGAGCAACTTGACCTACCACAGGATGGCCATGCATGAAGATGTGGACACTCACACTCTGAGAAAAGCTCTGTGGAACTACATCCACTGTCTTTACGGCATACGGTCAGAGCTCTTCCAAATCATGTGATCAACGAAGCTTTTATTTGTGTCGTCTCTGCTGTGTCTGATACGTATTCGATTGTCCTCGTGCAGCTACGATGATTACGACTACGGCAGCGTGAACGTGCTGTTGGAGCGCTCGCTGAAGGTGTTCGTTAAAACCGTGGCCTGTCACCCCGAGCAGACCACGGCGCGCATTTACCACGCCTTCTGGAGACGCTTCAGACACTCCGAAAAGGTACGAACACCGGACACAATCAAGGAATCAGATGACATTTTAACACATCTCTTTGGTACCTTTCTCAATGAAGCGTGGCCTCTTTCTTTTTAATTCCTTTTTTTAAGATGTCCTGTGTATGATCCAGTAACCTGAAGGTAATGACAGTTTTGTTGTTTTTGTATTACAGGTTCATGCTAACCTGATAGTGATGGAAGCCCGGCTACAAGCGGCCCTTCTTTATACCTTACGAGCCATCACACACTACATGAGAATGGCAAGCTTTACCTGCCAGGCTAACGGAGAAAACGCACtGGGTCGAAGCTCCGATTCTGACATGTCCCGTCGACACCGGTACGAGTCCGAGTCCGACGTCGGCCTGACTGTCAAATGCTTAGCGCGGCTGTGCAGCAGGGACGAAGAGGAGCGAGCAGCGGCTCTGGAGGAGCTCAGTCAAGAGGTCCTGGCGTGTCTGGGACCGGATCGGCGCGGTTCGGCCCAGCTCAGTAGGCAAACACTTTTACATCTGCTTCGGCTGTCCCGGTCGTGTCCGCTGCAGGAGGTTCGGGGGAGAGCAACCGAGCTGCTGCGAACCGCACAGGAAAAAGGAGTTGAAGTCCCCCGGGTGCTGGCAtCAGGCCCAAGTGCCTTTATTCCTGCAAAAGAGATGTTGAAAGAAGTGCCGGACCAGGACATCCTCATCGAATCGTTCCTTTCATTGGGCCGCGTGGACCACACCACCATGGTGATGGCAATGCACCCTGCCTACCTCAGCTGCTTCCTGAGGACCCAACATGCTCTGCTGGAGATGGACGGCCCCTTGCCCCGTCACTGGATACATTACATTGTTGTTATGGCTGCGGCTCGACATCACTGCTCGTACCTGGTGCAGCAGCACAGCGCCGGCTTCCTAGACGCTGGAGGGGAGGAGAGCTGGCTGAGCGGCCTCAAGCACGCTCCCACCAAACTCCAGAGCCTGCAAACCCTCAACAAACTGCTGGCACACAGACCCTGGCTCATCACGCAGCAGCACATCCAGGAGCTGGTGTGTCCCGGAGCGGAGCCTCGCTGGTCACTGGCTGAACTCATACACGCTGTGATCCTGATGGCACACGCTCACTCACTCTGCTCTTTTGGGTGGGGATGCGGCTTGAACCCTGAACCCGACCACATCGGAGGTTATACGTTCCAACTACCATCACCCAATCACCTTCCTCCGAGCCCCCACAGCCCTCAAAGCCCTCGGAGCCCCGCTCACGAGGATAGCAGGCCGGAGCTGGGTGACGGGGCAATGGAGGTGGAGGTGTTGATGCAGAGGATGGTGGCGCTGCAGCAGCAGGAGGAAGAGTGCACACAGGAGGAGATGGTCACTCGCTTTGAAAGGGAGAGGAGCGAGAGCATACCAACCACGGTCGTGCGAGAAGCACCACCCGATCTGGTGCTGCATCTAGTGGAGGAGCCACAGTTCAGGTACGAGGACTTTGCCCCGAGAGGAGAGCAGTCGCCACCCACCATGAGAGCTCAGGACTACTCCTGGGAGGACCACGGCTTCTCTCTGGTCAACAGACTACTGCCAGACATGGGCCAGCTCCTGGATGAGAAGTTCCAGGTTGTGAGCAACTTGACCTACCACAGGATGGCCATGCATGAAGATGTGGACACTCACACTCTGAGAAAAGCTCTGTGGAACTACATCCACTGTCTTTACGGCATACGCTACGATGATTACGACTACGGCAGCGTGAACGTGCTGTTGGAGCGCTCGCTGAAGGTGTTCGTTAAAACCGTGGCCTGTCACCCCGAGCAGACCACGGCGCGCATTTACCACGCCTTCTGGAGACGCTTCAGACACTCCGAAAAGGTTCATGCTAACCTGATAGTGATGGAAGCCCGGCTACAAGCGGCCCTTCTTTATACCTTACGAGCCATCACACACTACATGAGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04636	PA26	PA26 p53-induced protein (sestrin)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006730	Family	Sestrin	Interproscan
IPR029032	Homologous_superfamily	AhpD-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12474	P53 REGULATED PA26 NUCLEAR PROTEIN SESTRIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016239	Biological Process	positive regulation of macroautophagy	Interproscan
GO:0016684	Molecular Function	oxidoreductase activity, acting on peroxide as acceptor	Interproscan
GO:0070728	Molecular Function	L-leucine binding	Interproscan
GO:0071233	Biological Process	cellular response to L-leucine	Interproscan
GO:1901031	Biological Process	regulation of response to reactive oxygen species	Interproscan
GO:1904262	Biological Process	negative regulation of TORC1 signaling	Interproscan
GO:1990253	Biological Process	cellular response to leucine starvation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-