Gene detail

Detailed information of HS00192 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS00192	ADENYLYL CYCLASE-ASSOCIATED PROTEIN	chr1	5178222	5183496	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS00192

ATGGCTGACTTGGCGGGTCTGGTGCAGCGGCTGGAGGTGGCGGTGGGTCGCCTGGAGTCCATGTCAGGACCCGGAGGCAGCGGTGGAGATTCTGCTGGGGGAGGTGAATATATCCACTGTCATCGTTGTGAGATTTATTCCACTTATTATGAATAAGATGTCTGAGTGAGATGTGATGGAGCATTAGTCCGAGAAATCAAGTATTTACGCTTAGAGACCaaagctgagccttgaaaagctgagccttgaaGGAGCTtgaatttatttatttatttgtatgcgtgttattcgcataactcaaaaagtattaaaccgaatcgcatgaaatttggtgggatgattggttattatccggggaccatttgattagatgttgggatcgatcgggtcaaaggtcaaggtcatgaaaaggtcaaaatcttctttttaccatagcacggtcaatttctatccaattggcatgcaactaatgccaaaatgttcataattcaatgcccaatcttgtgatatgcgaaggtatgcgctctaccgagtgcccgttcaagttttatttatacatttatgttttgTGGTCTTTCAATGCTTTTTTAAAATGCCTTCTTTAATGCGTTTGTGTTTCTTCTCTGTAGCTGTCTCAGCGTTCGTTGAGGCTTTTGACGAGATCGTCAACGGGCCCCTCGCTCAGTACGTCTCCCTCAGCCAGAAGATTGGGGACGACGTCAAGACGCATGTAAGCGGCAGTTTAAAAACCGAGTTTTTACATATTTACTACAAAtaaacttgtgaatttcccctctgtgtgactaataaataattattttattttatCATATTACACATATCTGAGATGACTGCTGGAGATATTCTCAGAGTAGCATTTACAACTTCGACAAAACTTGACGAAGTCTCTAATCTTGAATGCCGTTTGAATGTCCGTCATTCGTTTGTGTCTCTTACTTTGTTGGGTCAAACGGTCAAACGCATGACCCAAAGACGGCAGGACGACCGTGTGATCTGACTTTTTGAACCCTCTCTCGTCTCTTCCAGGCAGACATGATGAAGCAGGCGTTCTCCAGTCAGAGGCAACTCCTCATCGTCGCCTCGTCCTCCCAGAAGCCGTCTGACGTGAGTTAAATGCACTCTGTGATTGGGCGGTGGCGCGATTGTCGTTATTCACTAAACTACATAAATTAATTTCAACAATTTGAATAATTCATTCTGGTCCTCTCCCGTCTTTTAGCCTGCAGCTCCATCAGTCGTTTCTCTGTCATGTTGTTCCTCATTTCCTGCCAGAACCTCAATGGCCCTAAACAGTTTGATTGATCTCAGACTAAAAGAAAACTGTCTTCGCGAATCTAAAAAGATAGAAGAAGAGTGCAATGAGTTATAATCTTGAATCTCTTGCCCCGTCAGGCCGGCCTGGCGGCTCTCCTGCAGCCGGTGTCCAAAGCCATCCAGCAGGTGCAGGCGTTCCGCGAGCAGCACCGCATGTCGGCACAGTTCAACCACCTCTCGGCCGTGTCCGAGAGTGTGCCCGCCCTCGGATGGGTCGCCATGGTGAGACTGGGCATGGGGGGGGGGGGGGGgCTCTTTGACTCTGTCATCGCTGTCGGCTGAGCGACAGTTTGTTGGCTGAAACATGGCGGACCAGCAACAGAGCCTCACTGTCACAGTTGAGATGATTAACTCGGCGTTTTTTTATTCCTGTGAATAATTCAGTCAAATACACAAAATGAATGCATTCTTTCTTTGGAGTGCtgaatatataattccagccagcagaggcttagcttagcataaagtctgtatacagaggtaaacaTCAGCTCCCGACCCACAGCTACAGTGAACACGCTACATGTATGTATAATTCGGACTCGGAACAAAGCATAAAGGCAACTCTTTTGTTGGCTCCACAGAGCCGTCGTGTTGTTTCCCCTCGGTCCTCGCGCTCAGCCAACAGAAAGCTGGAGCTTCACATTTAACGTGCAGACTTCTGTTCAGTTTTCTTCTGTGGAGTTTAGTTTTTTTATTTGTGAGCTCTAGCTGTTTCTCGAAATTGTATTTCCTAAAAGGTCAAACAATTCAATCTCAGTTTTGTGTTTACCTTTTTTTTTTATTGTGTCCCAGGCTCCTAAACCGTGCCCCTATGTTAAAGAGATGCAGGACGCTGCCATGTTCTACACCAACCGTGTGCTCAAGGAATTCAAGGAAAAGTAAGTAAAGCTACATTAAGATGGCCACGCATTCATTTGAAATGACCTCCTTCTGCCATTTCTTCTTCTTCTTCATGTGACATTAAATTGGTCAGATTAACTTTCATATGCAGCCAAGCGACATGCTCCGCCATCTAGCCTCCAGGCTCGTTTGTGAAGTCCAGTTCCACAGAGTCAGCGCTACCACGTGACGCGCTGACGCCAGACTTCCTGTTTTCTGATCTGAAATCAAAGCTCTTGTGTCGAGGAGCAGAGTTCAAGTTAGTCGAGTTGGAACGTAGAAGTAATGAGACTAAAATCCACCAGTTTAGACTGAGCCTTGACACAGAAACAGTTTAttcaaatgtcagtgactcaaattctgtaaaatactagtgtgtgtatctctgtgtgtgtgtgtgtgtgtgtatgtgtgtgtctctctctctctcggtgaaaaggaccaagataataccttagattatgaaataaataaaaaTGGTGACACTTGAGTTGCCCGTCTCCTCTCAGGGATAAGACCCATCTGGACTGGGTGCAGTCCTACGTCTCCATCTGGACTGAGCTGCAAAACTACATCAAAAAGCACCACATCACCGGGCTGGCCTGGAGCAAGAGCGTGAGTCTCATAACTCCTGTGAAGAGAAACCGTTAACACAAAGTTTAAACAACGAGACCGTATCCATCAAGCCACTGACGGCGAAGTGGAAGAGTAACCTTTAAAGAGCTGCTCTGAAGCGCTCGGGGGATTAATCGCATGTTCTTGGCAAGAACAGCCAGATGACCCTTATTTAAGTCCCGCCCCTCTTCGCTCTGTTCTCCAGTAAGAGTTGAGCAAGCGAGTCCGACCCTCGGTCAACGTTCCTCTTCTACTTCGATGTGTTAAGTCTGTTCAACGGTAGCGTTGCCATGGAAGTCGCCTCCGGGATCTATTTATAAGTCGCATAACCATTAATGGCACGTCTTCTTGTTTCCGAGGGGAACGAGTGAAGAATGTTTTTCCTGATTTCAATAATATGTGGTTATGATTTCTTTTAATTGCTACTCGTTGGACGTTCTGTCCGCCTCAGGGTCCAGTAGCGTCGGCCTCTGCAGCTCCCCCCCCGCCTCCTGCTGGATGTCCTCCCCCACCTCCCCCCGGACCACCTCCTCCCGCCATGGACCTGAGTGCATCGTCTGGCGGCGGCGACGCCGAGGACAACCGCAACGCGTTGTTCGCCGCCATCAACAAGGGAGGGAACATCACCAGCGGTAGGTGACGAGTCACTTTTCTATCTGATGCACCAGGTTTGAGTTCAATCTTCAACAAATCCGCTAGAAGTTCTGTTGAGTATTTTCAGTGGAGATGGAGGTAATATATTTCCTTTTTAATTTTAGTGACATAAAAATTTAAATTGAACTGAAATGCTCTTCGCGACCGCGCGGCTCGGAAACCCAATACTACCGCTCGGCTCATAACCGAGGATTTGGAGACGTGTTTTCGGACTAACTTGATGCGGCTCCTTCTCCTCTTGACCTGCTCAGGCCTGAAGCACGTGAGCGACGACGAGAAGACCCACAAGAACCCGACGCTGAGGAGCACGACCACTCCAGTACGCACCGGGCCAAAACCGTTCGCCTCCCCCACTCCCCGACCCGCTGCGCCGGCCGCCACCAAACTGGCCCCCGTGTTCGAGCTGGACGGGAAGAAATGGAAAGTGGTACGTTGTCGGTTCACTCGTACTTAAAATGAACGAATCGATGGATTGGTGTGTTTATGAATTACCTTTTTTTTCTCTTCTTGCCGTCTGCAGGAGAACCAAGAAGATGCTCAGAACCTGGTGATCGAAAATACTCAGCTGAAACAAGTGGTCTATGCTTACAAGTGTAACAAATCCACCCTGACCGTCAAGGACAAACTCAACTCCATCATCATCGGTAAGAACAAAACCGGATGTCGGATGTTTCGCTCGACCTCACCGGTCCAACTCTGCTGAGGTTTTGGATAAAGTTCTGAAGTTGCGTCCCTCTAGATTTCTATGCAGTTTTTTATTCGTCAGTTCACTTACCAGGTCATCCAGGGATGTCTGTACATCCATTGGCTGACTGCATATCTTTGATGGTGCCAATTTCTAAAAAAATCCAGTTGTAGCCAATGGCAGATCTTCCAAAACCTTCAACTTGATACCACAAAATATTCCCCAAATGGAAATAATACCAAAATATAGATATTTTCTGTCATACAGAATATCTTTTTTAAATATGTTAATCTGCaGGTAAATGAATTCTTTGTGAACATATATAAAAGTAAATTTCTCAATATTGTCTAATTATTAATGATATGAACAGTATAATAAAAAAACAACGGACCAATTACACATCTTTGAATAGCTTTGTTTCTTCATAATCATTTGTCACCTTATCCCAAAAATTGTCAAATGAAAGTTtTGCATTGTTAAAAAGTCGACTTGATATTTCTTTGGCCAGTTCTGACCTCTAGATCTGCGTTTGTTTCTCTCCATCAGACAACTGTAAGAAGGTGGGCCTGGTGTTCGACGACGTCGTCGGCATCGTTGAAATCATCAACTGCAGAGATGTCAAAATCCAGGTGTGTTGTGGAGTATTGAGTTCATCTTATTATTTCTTTGCTGCACCTTGACGCTGTCTCTTCACGGGCGCCCTGCTGTGTATTCATGGAGTCCTGCAGGAGAGCACTGACCCCCTGTGTCCTCCGTGTGTCCAGGTCCTGGGGAAGGTGCCCACGATCTCCATCAACAAGACCGACGGCTGCCAAGTCTACCTGAGCAAAGACTCCCTGAGCTGCGAGATCGTCAGCGCCAAGAGCTCCGAGATGAACGTCCTGGTGCCCGGCGAAGACGGAGAGTTTGTGAGTGTCCTTCGGGACGAATGATTGAAAGGATGTCCGGAGCTCTGTTTGTCTCCCCGTGTCCTGGATGTGGCGTCTCACACGTGGGTTCACACCTTCTCTCCCGTCTCTTTAGACGGAGCTTCCTGTTCCTGAGCAGTTCAAGACCGTCTGGGACGGCAAGAAGCTCGTTACCTCGTCAACGGAGGATGCCGGAATGGCTGACTTGGCGGGTCTGGTGCAGCGGCTGGAGGTGGCGGTGGGTCGCCTGGAGTCCATGTCAGGACCCGGAGGCAGCGGTGGAGATTCTGCTGGGGGAGCTGTCTCAGCGTTCGTTGAGGCTTTTGACGAGATCGTCAACGGGCCCCTCGCTCAGTACGTCTCCCTCAGCCAGAAGATTGGGGACGACGTCAAGACGCATGCAGACATGATGAAGCAGGCGTTCTCCAGTCAGAGGCAACTCCTCATCGTCGCCTCGTCCTCCCAGAAGCCGTCTGACGCCGGCCTGGCGGCTCTCCTGCAGCCGGTGTCCAAAGCCATCCAGCAGGTGCAGGCGTTCCGCGAGCAGCACCGCATGTCGGCACAGTTCAACCACCTCTCGGCCGTGTCCGAGAGTGTGCCCGCCCTCGGATGGGTCGCCATGGCTCCTAAACCGTGCCCCTATGTTAAAGAGATGCAGGACGCTGCCATGTTCTACACCAACCGTGTGCTCAAGGAATTCAAGGAAAAGGATAAGACCCATCTGGACTGGGTGCAGTCCTACGTCTCCATCTGGACTGAGCTGCAAAACTACATCAAAAAGCACCACATCACCGGGCTGGCCTGGAGCAAGAGCGGTCCAGTAGCGTCGGCCTCTGCAGCTCCCCCCCCGCCTCCTGCTGGATGTCCTCCCCCACCTCCCCCCGGACCACCTCCTCCCGCCATGGACCTGAGTGCATCGTCTGGCGGCGGCGACGCCGAGGACAACCGCAACGCGTTGTTCGCCGCCATCAACAAGGGAGGGAACATCACCAGCGGCCTGAAGCACGTGAGCGACGACGAGAAGACCCACAAGAACCCGACGCTGAGGAGCACGACCACTCCAGTACGCACCGGGCCAAAACCGTTCGCCTCCCCCACTCCCCGACCCGCTGCGCCGGCCGCCACCAAACTGGCCCCCGTGTTCGAGCTGGACGGGAAGAAATGGAAAGTGGAGAACCAAGAAGATGCTCAGAACCTGGTGATCGAAAATACTCAGCTGAAACAAGTGGTCTATGCTTACAAGTGTAACAAATCCACCCTGACCGTCAAGGACAAACTCAACTCCATCATCATCGACAACTGTAAGAAGGTGGGCCTGGTGTTCGACGACGTCGTCGGCATCGTTGAAATCATCAACTGCAGAGATGTCAAAATCCAGGTCCTGGGGAAGGTGCCCACGATCTCCATCAACAAGACCGACGGCTGCCAAGTCTACCTGAGCAAAGACTCCCTGAGCTGCGAGATCGTCAGCGCCAAGAGCTCCGAGATGAACGTCCTGGTGCCCGGCGAAGACGGAGAGTTTACGGAGCTTCCTGTTCCTGAGCAGTTCAAGACCGTCTGGGACGGCAAGAAGCTCGTTACCTCGTCAACGGAGGATGCCGGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01213	CAP_N	Adenylate cyclase associated (CAP) N terminal	Family	Interproscan
PF08603	CAP_C	Adenylate cyclase associated (CAP) C terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001837	Family	Adenylate cyclase-associated CAP	Interproscan
IPR006599	Domain	CARP motif	Interproscan
IPR013912	Domain	Adenylate cyclase-associated CAP, C-terminal	Interproscan
IPR013992	Domain	Adenylate cyclase-associated CAP, N-terminal	Interproscan
IPR016098	Homologous_superfamily	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	Interproscan
IPR017901	Domain	C-CAP/cofactor C-like domain	Interproscan
IPR018106	Conserved_site	CAP, conserved site, N-terminal	Interproscan
IPR036222	Homologous_superfamily	Adenylate cyclase-associated CAP, N-terminal domain superfamily	Interproscan
IPR036223	Homologous_superfamily	Adenylate cyclase-associated CAP, C-terminal superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10652	ADENYLYL CYCLASE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000902	Biological Process	cell morphogenesis	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007010	Biological Process	cytoskeleton organization	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0008179	Molecular Function	adenylate cyclase binding	Interproscan
GO:0019933	Biological Process	cAMP-mediated signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-