Gene detail

Detailed information of HS00174 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS00174	CYCLIN DEPENDANT KINASE-5 ACTIVATOR	chr1	4716852	4717850	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS00174

ATGGGCACGGTGCTGTCGCTGTCCCCCGGGTCCCGGAAGTCGGGCTACTATGACAACCGGCCGGGCTCGCTCAGCCAGTACACGAGCATCAGCAGCCGCTCCCTCAACAGCCAGAAGGACCGCGGAGGGCCGAAGAGGGGCCAGTCCATCTTCCTGCCGGCGCTCACGTGGAAGCGGCTGGTGGCCTCCACCAAGAAGAAGGGCGGCTCCAGGAAAGGCGGCCCCGGGGGCCTCGGGGACCCCCTcaacaacaacaacaacggcgtcaacatctaccacaagGACCCCCTGCTGCACCTCAACCACGGGAACGCAAAGAAGTCGCTGTCGTGCGCCAACCTGTCCAGCTACGAGGGCCCGGCGCTGCTGGGGCCGGGCTACGGGCCGGGCGTGGGCCGGGGCCACGGCGGGGGCGGCGGCTACGGCAAAACCCAGCAGCCGTCCTCCGTGAAGAAGCCCCTCCCCCAGGGGACCACGACCTCCTCGGCGTCGCCGAGGCGCGTCATCGTGCAGGCGTCCACCGGCGAGCTGCTGCGCTGCCTGGGCGACTTCCTGTGCCGCCGCTGCTACCGGCTGAAGCGCCTGGCGCCGGCCGACCCGGTGCTGTGGCTGCGGGCCGTGGACCGCTCGCTGCTGCTGCAGGGCTGGCAGGACCAGGCCTTCGTCACGCCGGCCAACGTGGTCTTCGTGTACATGCTGTGCCGCGACGTGGTGGACGGCGACGCGGTGGCGTCGGAGCACGAGCTGCGGGCCACGCTGCTCACCTGCCTGTACCTGTCCTACTCCTACATGGGCAACGAGATCTCCTACCCGCTCAAGCCCTTCCTGGTGGAGGCGGGCAAGGAGGCCTTCTGGGACCGCTGCCTCGCCATCATCGACGCCACCAGCGGCAAGATGCTGCGCATCAACGCCGACCCGCACTTCTTCACGCGGATATTCGCCGAGCTGAAGAGCGAGGGCGGCTGCGGCCCGCGGGACTTCAGCCGGCTGCTGGACCGGATGGGCACGGTGCTGTCGCTGTCCCCCGGGTCCCGGAAGTCGGGCTACTATGACAACCGGCCGGGCTCGCTCAGCCAGTACACGAGCATCAGCAGCCGCTCCCTCAACAGCCAGAAGGACCGCGGAGGGCCGAAGAGGGGCCAGTCCATCTTCCTGCCGGCGCTCACGTGGAAGCGGCTGGTGGCCTCCACCAAGAAGAAGGGCGGCTCCAGGAAAGGCGGCCCCGGGGGCCTCGGGGACCCCCTcaacaacaacaacaacggcgtcaacatctaccacaagGACCCCCTGCTGCACCTCAACCACGGGAACGCAAAGAAGTCGCTGTCGTGCGCCAACCTGTCCAGCTACGAGGGCCCGGCGCTGCTGGGGCCGGGCTACGGGCCGGGCGTGGGCCGGGGCCACGGCGGGGGCGGCGGCTACGGCAAAACCCAGCAGCCGTCCTCCGTGAAGAAGCCCCTCCCCCAGGGGACCACGACCTCCTCGGCGTCGCCGAGGCGCGTCATCGTGCAGGCGTCCACCGGCGAGCTGCTGCGCTGCCTGGGCGACTTCCTGTGCCGCCGCTGCTACCGGCTGAAGCGCCTGGCGCCGGCCGACCCGGTGCTGTGGCTGCGGGCCGTGGACCGCTCGCTGCTGCTGCAGGGCTGGCAGGACCAGGCCTTCGTCACGCCGGCCAACGTGGTCTTCGTGTACATGCTGTGCCGCGACGTGGTGGACGGCGACGCGGTGGCGTCGGAGCACGAGCTGCGGGCCACGCTGCTCACCTGCCTGTACCTGTCCTACTCCTACATGGGCAACGAGATCTCCTACCCGCTCAAGCCCTTCCTGGTGGAGGCGGGCAAGGAGGCCTTCTGGGACCGCTGCCTCGCCATCATCGACGCCACCAGCGGCAAGATGCTGCGCATCAACGCCGACCCGCACTTCTTCACGCGGATATTCGCCGAGCTGAAGAGCGAGGGCGGCTGCGGCCCGCGGGACTTCAGCCGGCTGCTGGACCGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03261	CDK5_activator	Cyclin-dependent kinase 5 activator protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004944	Family	Cyclin-dependent kinase 5 activator	Interproscan
IPR036915	Homologous_superfamily	Cyclin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23401	CYCLIN DEPENDANT KINASE-5 ACTIVATOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan
GO:0007420	Biological Process	brain development	Interproscan
GO:0016533	Cellular Component	protein kinase 5 complex	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:0030426	Cellular Component	growth cone	Interproscan
GO:0061575	Molecular Function	cyclin-dependent protein serine/threonine kinase activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-