Gene detail

Detailed information of HS00121 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS00121	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69	chr1	3550897	3557117	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS00121

CGAAGAGGCAGCACGAAGGCTCAGATGCGGCATTGCATCCGAGTGCTGAGGTCTGTGACGTCTTTAGGAGAAGACGCGGTCAACCAGGACTTCTGTGATCAAGGGACCATCAGCCAGTTCCTGGGTACGCTCAGTCTCAACGTGCAGAGACATTTTTACTTaaagggccagcgtgcacgatttggtggcatcgagctgttgcagattgcaaacaactaaatagctctccaacactcctccctgaacaccattcagctcagaggccgtggttcatatgagaaaaccactttaggagcaaTCAGAAAGAAAAGAAAACACCAAACAGCCTCTCTTGAACCAGTGTTCCCGCCCTAAGCTAAAGAAAAACCCAATGATTCTCACTAATAAAAACCTATTTAATCTCTGCTAATGGAACCTTTGAAATCCTACACACTGGCCGTTTTAATAAACATAGGCCACACCCACTGACCCGTGGTCCTCTCTCAGGGATTCTGATGCAGATGGAAGCGAGTCCCGACGAGGAGGACGTGGTCAGCCTGGAGATAAAGTCCGATATCCAACTGATACTTTCGGCGCTGTGTGAGAACGACATGCACAGAAAGGTGACGCTGGTTAAAGCCAGTTGTAACTATAAGTAGTGCTATAAGGTCACTTTGAGACCACCAGGTTCACTCAGAGCCACTGAAGGACTTTGAAATGTGTTTGAAAGATGGCAAGAGGTCACGGCaTTGTTCTTAAGCTCTAAACTTATTTATTTGGTCGCGCCACAGGAGCTGTTTGGATCTGAGGGCGTGGAGATGGCGATTCACTTCCTGAAGAAAGGCTGCGACAGCTTCTACAGCGGCGTCGGACACAACAAGCTCATCCTGTCCACGGTGGACTGCGTGAGGTCAGAGCCGCGCAGGAAACTCAAACTGGCAAACCGTTTGAATTTAAATGTCATTTATTTAAGGATTAAACATAGAAAtGAATGTCCCGATCACACACGTCCAGAATGAATTTACGACTAGAGGTATCACCGCGTCTtCCTGAGCCAGAGGCACGCTGAGGCCTGCAGCCCGGGCCCAATGCCCTCGCATGGGTTCAGCTGATGTGTgtgtTGCGTAACAGTTTAAATGAGGACTCTTATTATGATGAATTTATGTCGGAAATGTAAATGTTTTCTCTCGTTAATTTAAATGTTTAACTCAAAGGTGTACTTCATTTGAAAGGTGCAATGAATGTTGTCGATTATTTTCTTCAACTCAAACCCAATCAAGAGTTACATGTTTGGTATTTAATTAACcCTCAATGGAAGAAACCAAATGAAGGTTAATAACACACTgAACTCTCACCTCATCTCCACCCTCCAACAATATGTCATCGTCATTCCCTTGATATGCTTTGTCCTTTGACCTTTGACCTTGTTGCTTAGGTTTCTGAAAACAGTCCAAGACACATGAAGTATAAGATAGTAAACATTTAATATGGGAGATTTTGCCGGACAAGCAGgaaggaaatcacccgctgcgtccccacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccccatcaggtcctgtatagTGGGCTGCTACACCACAGAAGATTACTTTTTGGCTAAAGAGGGGGCGTGTCTTCTGTTGGACTTACTCAGTGTAAGTGGATGATTGATGTTCACCTGAAGGTGTTGTTGTATGTGTGTGTCCataagcacctgcatgtaaagaactgatatcaaacatggcgtctctctctctctctccctctctctctctttctctctccaacagtcgagccccagatGCCTACACTCCAACGTCCTCGCCTCCCTGCTGGAGTTGAGCGACAACCCCAACTCCCTGTCCCACGTCCTGAGCTGGAGGGACGCCGGTGGGCAGAGCGCCCCCAGGCTGCTGCTGCACCTGTGGAGGGACGAGGAGGAGGAGCTTCAAGTCAGCCGCAACCGACACGGAGGGGTCGCAGGTCAGAGACGTTGAGGACTtACAAGTTATTGTTATGGAAATGAAAATGTTCaatgccatgtggaacacttcgatgtctttaagcgtttatgaaacagagacttggaataatttggttgaatggTTATAGTTATACACATTCAACAAGCTCCCCTCCCCCACACGATGGTGCGTTTACACCACCGCTAGCACACTGGAGCCGAGTGAGGGACAAAGTGCTAAGTGTCCAAAAATtTGTTTATTAGGGGAAACAAACCCGAATCAAAGGGTGAAACAATAATCCCATTTTGAATCCTGTTTGATAAAACGTTAACcTTTTATAGAAGCTGCAGCGGCAGCTCTTCCGGCTGATATTCAGACATCTTTCCCGTGCATCTCATTGTATCTCGTTCCCTTGTGGACCCGAAGACCCCCAGAGACCCGTCCTCATGCACCAGCAGCAGGAGGACAGCCTGGTGTtGTTTCCTGGCAGCACCTCGAGTGCAGCGGTGCTGGAGCTGACGGAGAACCTGCGGCTAAAGATCTACTCCATCTTCTGCAAACTGGGTAAGGATTACAAAGTTATAATGCTATTTCTATAATGCCTAAAAGCTGTGGTTTAAGTCCCATTATACAGCTTAAAAAGTAGCCACCAGGTATGTAAGTGTGGATCTAGATCAGTCTTTTAGTATTACACAGATGGTAAAACGAGATCCATGATTATTATAGCAATCAACTTAATCCAGGAAAGAAGTGTCACTTGAGGCTGGTTAAAAATCCCGATGAGAGTAAATCAGCAAACGGATATTCAGTATATGATGAACTATGCTGTGTGCAAAATAATAATGACTTTGTCCCTTCTGCAGGTTTTCAAGACCTCCCCGGACTGTCGAGACAACATCATGTGACCTTGAGCATCGTCAGGAGATACCTGGACTTCAAGGTAGAGCTGCTTCAGCATGTGTCGGAGAGGAAAGTAGTTTCATTCTGCCATTTTTACACCATCAGAATAATTAGACGTGTAAAACAAGTTCTCATTTGTTACATTTAAACTCTAAAAATGACGGCGAGAGTCCCGGAGACGTTGAGAACATCGAGGCGTGTGCCGCAGGTCGGAGAGGTGTGGGACGAGATCCGCAGGGAGCTGACTCTGGACGGGGTGAGGCCCATCACCCCCGACGAGGAGGCCCTGAGCGCCATCTGTAGGATAGCGGCGGACACGGCGAGGAGGGTGGCGGCGGAGCAGAACGACATCCTggagcagcaggagaaggaggacgccggcgaggaggagCTGCTGTACACGGAGGTGCCGAGAGTCGGATACGGCAGAACGTCTGCGAACGTCGGCCGAGGATGTTTACCACACACACGGCCGATGTGCCGGTGTAGATATGTCATCTTTCcagggtttatacggtcatggaaaacctggaaaagtcatggaattttaaaatggttatttccaggcctggaaaagtccttgaaagaattgaaatcacaaaagttacggaaaagtcctggacatttttttatattcacttgttcattgacgcagagtttgaaataatcaatatgttactaaaagaaagacgctcaaaatataagccggcatactcgcggcgcaatatattagttttcccactgcaagtgaacgcacctcaactgaaaagttcggtggccatagcaacagtagcttcgggataagggatgggaatttggtttaaagtcctggaaaccccttggtcaacatgtgtgtgacccctGTTTTCCTCTCAcGAACTGAAATAGGAACACATCTGACACAACGCATCCCCATGTGTCTGTagGTAGGGtGTCTTTCCATTGGTGCAGCCTTCAATGCTTTCTTAtacagtgggtacggaaagtattcagacccctttaaaatgttcactaaaatcaaaaaagttcattttatttctcattaatgttcactcagcaccccatctggacagaaaaacacagaaatgtagacatttttgcaaatttgttagaaaagaaaaactgagatatcacctggtcataagtattcagaccctttgctgtgacgctcatatttaaccctcatgctgtccatttcttctgatcctccttgagatgggtctactccttcattagagtccagctgtgtttaaataaaaatgtaaaggggtctgaatactttccgtacccactgTATATATTCAATATAAATTGGTGGCTATTGACACTGAACTTGACCTATACTCCATGTAGCAACAGCAGCCCTCCTCTTCTCTTTGTTCACACGTCTCCGTTTGCAGATGAAGTCTCACTGGAAGCAGCGGGAGCTCACGGCCAAGTCGTGGGACCGTTACGTCTCCAGGACTTCTAACTATGACATCCTCAAGGTATTCACTCGTCTCGTAACGTCCAGCAGATGGACGTCGTCGCTGCGCGTTGAAAGACTTGAAGAACTACGCTGTTTGTTTGTTTGTACAGGAAGTGAAAGCTCAGCGGGAGGAGTACATTGAATCCTCCAGAGCCGAAGCAAAGCACCCGGATGCTGCCCCCCACCCgaaagaggtctcacacacacacacacacacacacacacacacacacacacacacaatgagttttagtcgtcattcagctggaccacggtctttattttatgtatgtactgtatatatatatatatatactttattgatgataatgcacaatatgatatacagggatcaaagaacaagtattttacatttttaccttcgcattgaaaatgcggaaggtaatgttttgatcgccgtgtatttatttatttatttatatgcgtgttattcgcagaactcaaaaagtattgaaccgaatcgcatgaaatttggtgggatgattggttattatccggggaccagttgattagattttgggatcgatcgggtcaacggtcaaggtcaaaggtcatgaacaggtcaaaatcttcttgaatcgcatgaaatttggtgggatgattggttattatccggggaccatttgattagattttgggatcgatcgggtcaaagttcaagttcatgaaaaggtcaacatcttctttttaccatagcacggtcaatttttatccaattggcatgcaactaatgccaaaatgttcataattcaatgcccaatcttgtgatatgcgaaggtatgcgctctaccgagtgcccattctagttgtatatgtgtcaatcggtttacaattgtaaagaagaaaacagaaaaaataaaagtaaagaaactaataaaagatacaaataataaaacaggcaaaacaaaaataacaaataattattataataatgaataataaaacagccacccgcagacccaccccacatggccttcacattttttcccatagtttgcgtataatattgtaaaactaaagttaagtatttaggtttagttacagttagtcagataagggcagaggaccagatacatacacacacattacacgtgtctcattcaggagacaacaatgacagatttagaaaatatgaaatgaaaggttgacatttcttcgtgaagttttcattacagcctctaaTGAACCACGGTTCTGACTCCAATAATAACcTCTGCACAGACCCAACACTCATCTTTAATACAGGAAGAAGAACAAATGAAACAGTAAAGTCTTCCTGATACACTAAATGATACAAGAATACAACAGTAAATTAAGTCAGGAGGTAATGCTGCTTTGAGTTTAGAGTTTAGGAAATTTAATTTcTTTTTCAAAATGTCTTTTGTGATTTGAGGGAATGTCTTGTGTCTAATTCACAGAAATTGTTTTCGAAAGCTACATAATTAAACAGGGAGCAGTCAGTATTGAAGAAGTGAAAttatttatttatttttgtttatttatttgaatatatttgtatttatttatttattcatttattatttattattttatttatttattttaatttatttatatgtttttatttatatgtttttatttatttctactttctattggtatttatttttattaatttgtatgaatttttacttatttatttgtattatttttttatAAATGCTGTCTTGCTGTGTCTCCTCAGCATTTCGTGGGTCAGGCGATGTCCGTGGAGAGAACCGGCGCCGAGGGGCCCGCGGGAGTGAAAGTGACCATCGCCCGAGTTCCCATTGAGGCCGCGGGTCCGGgaCCCGTCGGAGtCTCGAGTCAGGACCCGGAGTACTTCAGCACCGTGTCTGTAACGGACCGAAGAGGCAGCACGAAGGCTCAGATGCGGCATTGCATCCGAGTGCTGAGGTCTGTGACGTCTTTAGGAGAAGACGCGGTCAACCAGGACTTCTGTGATCAAGGGACCATCAGCCAGTTCCTGGGGATTCTGATGCAGATGGAAGCGAGTCCCGACGAGGAGGACGTGGTCAGCCTGGAGATAAAGTCCGATATCCAACTGATACTTTCGGCGCTGTGTGAGAACGACATGCACAGAAAGGAGCTGTTTGGATCTGAGGGCGTGGAGATGGCGATTCACTTCCTGAAGAAAGGCTGCGACAGCTTCTACAGCGGCGTCGGACACAACAAGCTCATCCTGTCCACGGTGGACTGCGTGAGgtcctgtatagTGGGCTGCTACACCACAGAAGATTACTTTTTGGCTAAAGAGGGGGCGTGTCTTCTGTTGGACTTACTCAGTtcgagccccagatGCCTACACTCCAACGTCCTCGCCTCCCTGCTGGAGTTGAGCGACAACCCCAACTCCCTGTCCCACGTCCTGAGCTGGAGGGACGCCGGTGGGCAGAGCGCCCCCAGGCTGCTGCTGCACCTGTGGAGGGACGAGGAGGAGGAGCTTCAAGTCAGCCGCAACCGACACGGAGGGGTCGCAGGACCCGAAGACCCCCAGAGACCCGTCCTCATGCACCAGCAGCAGGAGGACAGCCTGGTGTtGTTTCCTGGCAGCACCTCGAGTGCAGCGGTGCTGGAGCTGACGGAGAACCTGCGGCTAAAGATCTACTCCATCTTCTGCAAACTGGGTTTTCAAGACCTCCCCGGACTGTCGAGACAACATCATGTGACCTTGAGCATCGTCAGGAGATACCTGGACTTCAAGGTCGGAGAGGTGTGGGACGAGATCCGCAGGGAGCTGACTCTGGACGGGGTGAGGCCCATCACCCCCGACGAGGAGGCCCTGAGCGCCATCTGTAGGATAGCGGCGGACACGGCGAGGAGGGTGGCGGCGGAGCAGAACGACATCCTggagcagcaggagaaggaggacgccggcgaggaggagCTGCTGTACACGGAGATGAAGTCTCACTGGAAGCAGCGGGAGCTCACGGCCAAGTCGTGGGACCGTTACGTCTCCAGGACTTCTAACTATGACATCCTCAAGGAAGTGAAAGCTCAGCGGGAGGAGTACATTGAATCCTCCAGAGCCGAAGCAAAGCACCCGGATGCTGCCCCCCACCCgaaagagCATTTCGTGGGTCAGGCGATGTCCGTGGAGAGAACCGGCGCCGAGGGGCCCGCGGGAGTGAAAGTGACCATCGCCCGAGTTCCCATTGAGGCCGCGGGTCCGGgaCCCGTCGGAGtCTCGAGTCAGGACCCGGAGTACTTCAGCACCGTGTCTGTAACGGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21049	CFA69_ARM_rpt	Cilia- and flagella-associated protein 69, ARM repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR048732	Family	Cilia- and flagella-associated protein 69	Interproscan
IPR048733	Domain	Cilia- and flagella-associated protein 69, ARM repeats domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14716	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0042048	Biological Process	olfactory behavior	Interproscan
GO:0097225	Cellular Component	sperm midpiece	Interproscan
GO:0097730	Cellular Component	non-motile cilium	Interproscan
GO:1902093	Biological Process	positive regulation of flagellated sperm motility	Interproscan
GO:1990834	Biological Process	response to odorant	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-