Gene detail

Detailed information of HS00076 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS00076	KINESIN-LIKE PROTEIN KLP-3	chr1	2196986	2202472	-

Gene Structure

More details in Jbrowse Sequence

CDS

HS00076

ATGTCCCGCTTGCCAGTCAGTTCAAGCAAGAGGGTCCTGCTGGCGAGCAGCAGCAGCTCAGAGAATGGACAAGATGTTGAGCCTGCTCAGAAGAAGATTCGCAAAGACCCCGAGCCCGTCAAACCACAAGCAGCGGCTACGATCATCGGCGGCCGGCGGCTTCCTGCCGCAGCAACCAGGGCACCCATTTCACGGCCAGTCAGAGGCGTGGGCGCTGCCACCGTGGCGGTTGGTCCTTCCAGAGGCGTCCTGAAACAATCTATAGCTTCAACTGCAGCAAAGGGAGGCAACGCGAAACCAACTGTTGCACCGGCATGCCCCAAAACAGGTGTGGTCGGGGGCTCCAAGCGTCAACCATGGGACCTGAAGGGCAAGGTCATCGACATGGAGGGTAAGATCCGTAACTACCAGACCAAGGTCAAAGCGACCAGCCAGGAGAACGAGACGCTGAAAGGCACGATGGTCCAGAGTCAGTCGAGAGTCGCTGAAGTGGAGAAAACTGTAGCTCGTCAGAGGAGCCAGATCAGTGAGTATGAGGCGGAGCTGCAGGTGCTGTCAGGGGTGCGGGATGAGCTGGAGATGGTGTCCAGTGATAAGAGCACTCTTGAAAAGGAGCTCTCTAACTTTGAGAGCAAACACAAGGTCATGGAGACTCTGCGGGAGAGCCAGGAGACGGAGCTGCAAACTCTCAAGATGAAGCTGTCGGTCCAGGAGTCGACTCTGGCCCGCCTGCAGGTGACCCTCAGAGACACGGAGGAAGAGGTCAGCTCTCTCAAGGACACTGTGGTCCAGCAGAAGGACGAGCTGCACGCCGGGGAGATGGAGCGCCGGCGGCTCCACAACGCCATCCAGGAGCTGAAGGGCAACATTCGGGTCTTTTGCCGGGTGCGCCCTCTGGTGGAGGGAGGCCTCAGCAAGCACATCCAGCTGGCGGCCAGCGACAGCACCACGATAACGCTGGCTAAAACAGAGGAGTCCCACACAGGCAAAGCTGCTGACACTCAGAAGAACTACAACTTCAATTTTGACCGCGTGTTTGGCCCCCAGTCTTTGCAGCAGGAGGTCTTCGAGGAGATCTCGCTGCTGGTGCAGTCGGCGTTGGACGGCTACAACGTCTGCTGCTTCGCTTACGGCCAGACGGGCAGCGGCAAGACGTACACCATGGAGGGGGACGAGTGTGACGAGTCCAGAGGCGTCATTCCCAGAGCCGTGAAGCAGATCTTCAGAGCGGCAGAGAAACTAGCGGCGCAGGGCTGGGAGTTCACCTTCACGGCGAGCTTTGTGGAAATTTACAACGAGAGCCTGCGAGACCTCCTGTACTCCGGCAAGGCCAGCAAGAGGCCCGAGCACGAGATCCGGAAGTCCTCCAGCAACGAGGTGACCATCACCAACCTCACGTACGAGCGCGTCTGCAACGAGGATCAGGTACGGACCCGTCCACGGCAGACCTCCATGGGTAAACGACGATCCGTGTCATGTCCTCACGCCTCAATGCTCCGTTTGACACCCCCCACCCGCCAGGTTCTGGGCCTCATAATGTTGGCCAATCAGAATCGCTCCACGGCCCAGACGACCCAGAACGACCGCTCCTCCCGCTCCCATTCGGTGTTCCAGCTGGACATCGAGGGAGTGAACGTTGGCCGGGATGTCAAGTGCAAGTGTGCGTATACTCCCACGCATTACCCAGAATACAGCTCTGTGGTTCGGGTTGAGACGACTCATTTTAGAACCCGAGTTCTGCGTTTCTTTATCTCCGTTAAACCCGCTTGTGCGTTCATTTATTCGCTCAGCCACTCTGTGCCTGGTGGACTTGGCCGGCAGCGAGCGAATGCTGAAGAGTCAGTCTCAGGGCGAGCGCTTCAAGGAGATGACGTCCATCAACGGCTCCCTGTCCAACCTCGGCATCGTCATCACCGCGCTGGCCAACAAGGAGAGCTACGTGCCGTACAGGAACTCCAAGCTGACCTATCTGCTGCAGGGGTGCCTGGGAGGAAACAGCAAAACGTGAGCTCCGTCGCCAAAACCGCCTCCGGACACGAGTGgCCTCGGCGCCCTGAGGCTGCGTTGTGTCCTTTGGGCTCGCAGCAGCAACTCATTGATCTACAGGAAGTGGTTTTATCCATTATT

Transcript

HS00076

ATGTCCCGCTTGCCAGTCAGTTCAAGCAAGAGGGTCCTGCTGGCGAGCAGCAGCAGCTCAGAGAATGGACAAGATGTTGAGCCTGCTCAGGTTTGTACTAAAACCCTCTCCATCTTTTGTCACTTTTATTCTGCTGCTGCACCTCATGCAACCCGTTATCCAGCTCACAGCACCCAGGTGTGGCTCTATCGCACGTTCTTCACATTAAATATCAGTTTCTCTCTCTGCCATGAAGCCGATTATAATGTCTCACATGTTAAAGTTCTCGCTGCGGTAGTTCAAACAAGGTTTTGATTAAACCTCCATACTGAGTCCCGATAATGATCATTTCATGaacacagcttgggtcccccactgaccctcatgaacagattcatatgttgactgtttttgattgttgttgttttgtttgtctgtctaacgtgtacacaccagccgccaaggcaaattctttgtgtgtcatacgtagcaaataaatacttctgATTGTGATGATAGGTGTGCTAGAGGCTGAATCACTGCTGGCGCCTCACGCTGGTGGTGTTTCTTGTATTTGCAGAAGAAGATTCGCAAAGACCCCGAGCCCGTCAAACCACAAGCAGCGGCTACGATCATCGGCGGCCGGCGGCTTCCTGCCGCAGCAACCAGGGCACCCATTTGTAAGCGAGCTGAGAGTTTCAGAGTCTTTGTTTTTTCTGTACGACTGTATGAGATAATTTGAGGAAAACATCAAGCTTGTGTGTTTTAATTTGTGAGGTTATTGTCTTGTTACAAAACATCAACCTCTCCGTCCCACGTTGCCTCCCACACAGCACGGCCAGTCAGAGGCGTGGGCGCTGCCACCGTGGCGGTTGGTCCTTCCAGAGGTAAGACGAGCTAAGGGAATACGCTGAGCCGTGTTCTGTTGTGTCAGGATTGCAGGACTAGATGTATTACTATCGAAGAGATGTGGATCCATCGTGTTATTACGGTAACAACTGACTGATTTGGACATTCTTCTTTATTGGGTTGTTTTCCCCTTCAGGCGTCCTGAAACAATCTATAGCTTCAACTGCAGCAAAGGGAGGCAACGCGAAACCAACTGTTGCACCGGCATGCCCCAAAACAGGTGAATGAATCATTTCCACGTGGTTATTGTTCCTCAGCGAATGATGTCAAATCAAGTGAATTGATTATTGAGCTACTTGAAAAACAGTGTTTTGAGTTTAAGGCGGCGTTGCATCAACACAAGTTTATTTAATCTGAGATGAGTTTTATTCAGAGCTCTGCTGCACAATTCCAAAGAGGCGTGTGTAGACCAGTCTTGTTCCGTTGTGGTCTGAATGGACCTGTCACGCCTGTTGTTCACGCTCGTTGTGCACAGGTGTGGTCGGGGGCTCCAAGCGTCAACCATGGGACCTGAAGGGCAAGGTCATCGACATGGAGGGTAAGATCCGTAACTACCAGACCAAGGTCAAAGCGACCAGCCAGGAGAACGAGACGCTGAAAGGCACGATGGTCCAGAGTCAGTCGAGAGTCGCTGAAGTGGAGAAAACTGTAGCTCGTCAGAGGAGCCAGATCAGGTGCCGAGGACCGTTCCATTTGTAAAAGAGCGTTACGTCATCATAACGGCGGTTCATTCTGACGCCGCTAAATGTCCCGTCTGCTGTGGTTCCAGTGAGTATGAGGCGGAGCTGCAGGTGCTGTCAGGGGTGCGGGATGAGCTGGAGATGGTGTCCAGTGATAAGAGCACTCTTGAAAAGGAGCTCTCTAACTTTGAGAGCAAACACAAGGTCATGGAGACTCTGCGGGAGAGCCAGGAGACGGAGCTGCAAACTCTCAAGGTAGGAAGTCTGTGGCTGGAATACCAGCCAATACTGGCAAGTATTGTATAGCCTTAATAGAACTAGTGCGCTACCACAGGACTATTcagggttcgtacggtcatggaaaacctggaaaagtcatcgaattttaaaatggtcatttccaggcctggagaagtcatggaaaaaacttaaatcatcaaagttttggaaaagtcatggaaatgtgttataatcacatgttcatttacgccgagtttgaaataattaatatgttttttaaagaaagacgctcaaaatataagccggcgtacgctctcaatacgcaaaatgttctatatttttaatgtttataccgagatttcagtttggtcatggaaatttgttttaaagtcctgcgaaagtcctggaaatccactggtcaaaatgtgtaagaaccctgactattattcacTCAAACTACTGAGCATGAAGGAGGTGAAGTGTGACCCGGATCTTTATCAATGTCTCCTCTCCAGATGAAGCTGTCGGTCCAGGAGTCGACTCTGGCCCGCCTGCAGGTGACCCTCAGAGACACGGAGGAAGAGGTCAGCTCTCTCAAGGACACTGTGGTCCAGCAGAAGGACGAGCTGCACGCCGGGGAGATGGAGCGCCGGCGGCTCCACAACGCCATCCAGGAGCTGAAGGTGAGGACACTTTATTTCTGTTCTCACCGTCCCGAGGGAAACGCTGCCGAGAGATGAATTTTTCTCATCGCCCTTTTTTCTTGCAGGGCAACATTCGGGTCTTTTGCCGGGTGCGCCCTCTGGTGGAGGGAGGCCTCAGCAAGCACATCCAGCTGGCGGCCAGCGACAGCACCACGATAACGCTGGCTAAAACAGAGGAGGTGAGACTCCAGGGGCCGAGCCACTTCGGACATGTGAATAAATAGATCCATCAAGGCGTTGTTGTCCTCTGCAGCCACAGGAACAGGTGGTAGCCACAGTTTCCAGGATGATTCTGAcagggttcgtacagtcatggaaaacctggaaaagtcatggaattttaaaatggtcatttccaggcctggaaaaaacgtaaatcgtaaaagttttgttaaagtcatggaaatttgttataatcacatgttcattcatgcagagtttaaaataattaatatgttttttaaagaaagacgctcacaatataagccggcgtacgcctttaatacgcaacatgttctaaattcttcatgtttataccgagatttcagtttggtcatggaaatgtggtttaaagtcatggaaatccatttgtcaacatgtgtaagaaccctgtTCTGAGCCAGTTGCATCATAGATAAGAAATTACTTTAATGAATTGGATGCCACAGTTAACATAACAAACGTGTTGTCGGGCTCCGTCAGACATGTTaATTCTTTGCTTTGATTTGACTAAAACTTAATTCTGTGTTTTAGTCCCACACAGGCAAAGCTGCTGACACTCAGAAGAACTACAACTTCAATTTTGACCGCGTGTTTGGCCCCCAGTCTTTGCAGCAGGAGGTAAACAACATGCATCAAAACGGGACGTGAAAGATTCTTCACGTTATCGTGAAAACATTTAaAGTATAAAATCCATCCGTTTTCCCCACCAGAGCGGCGAAGTCCTGATGCTTTTGTCGCTTCCAGGTCTTCGAGGAGATCTCGCTGCTGGTGCAGTCGGCGTTGGACGGCTACAACGTCTGCTGCTTCGCTTACGGCCAGACGGGCAGCGGCAAGACGTACACCATGGAGGGGGACGAGTGTGACGAGTCCAGAGGCGTCATTCCCAGAGCCGTGAAGCAGATCTTCAGAGCGGCAGAGAAACTAGCGGCGCAGGGCTGGGAGGTCAGTGGAGGAGGAAGAGGAGTGTACACGTTgaagatcttctctgcttttcacccatccttagtcgtgagggaccagtgggctgcaggggaacacatccaaggaAAAGAGGCCGCTGTATTCAAAGTGAACCGTTGTTTATTTCACCCGCGGGTCGTTATTATGACTCGCCAAAAGCATTTTAAAACGGCCATAATTAAAAAGAATTCTGGCCACTTCAGTAGAAACATGTGAACACGtGCATCATCGCCTTTTTAAGTTGGTATGGGGAACCAGCAAATGACACTTCCAGCCGTGTTCGTGGCCATCTTGCCGACGCAAGGCCAACCTTCACTGTGTGAGTCTTTCTGGTCCTGAGGGAAACGTCTACGGCGAACTCTGTTCGTTATGTGCGACTCAAAATGTGTAAACTTTATTAATTGTGCAGACAATGGCTGCAGACAAGTCATTTTACTTCAGGATATTTTTATTAAATATTCTAGTATTGTCGCTGTAGAGGATGTCAGCAATATTGTGACTTCCAGGAACAAAGTTGATCTCTTACTGGACATCGGCACAACTTATTCAACTAAACAAAAACTCAGGACGTGGAATTTAAACTGATTCAGATACATGTGtattattattattattattactaAAGTACCGTCGGACACATCAATAGGACAACACGATGTCCCAGAGACaGGTGCATCGGCGGCAGCCCAGTCTGTAGCTTTGGGGAAAAGAAGTCTCTGGTGTAGACTCACACAGTGATCCCAGCACCACCCAGCACAGCCGCTgCATGTCCCACCACCACCGTGCTCTGCCTCGGCACTCAGCCTGTCTGTGTCCGTTTGTCTCAGTTCACCTTCACGGCGAGCTTTGTGGAAATTTACAACGAGAGCCTGCGAGACCTCCTGTACTCCGGCAAGGCCAGCAAGAGGCCCGAGCACGAGATCCGGAAGTCCTCCAGCAACGAGGTGACCATCACCAACCTCACGTACGAGCGCGTCTGCAACGAGGATCAGGTACGGACCCGTCCACGGCAGACCTCCATGGGTAAACGACGATCCGTGTCATGTCCTCACGCCTCAATGCTCCGTTTGACACCCCCCACCCGCCAGGTTCTGGGCCTCATAATGTTGGCCAATCAGAATCGCTCCACGGCCCAGACGACCCAGAACGACCGCTCCTCCCGCTCCCATTCGGTGTTCCAGCTGGACATCGAGGGAGTGAACGTTGGCCGGGATGTCAAGTGCAAGTGTGCGTATACTCCCACGCATTACCCAGAATACAGCTCTGTGGTTCGGGTTGAGACGACTCATTTTAGAACCCGAGTTCTGCGTTTCTTTATCTCCGTTAAACCCGCTTGTGCGTTCATTTATTCGCTCAGCCACTCTGTGCCTGGTGGACTTGGCCGGCAGCGAGCGAATGCTGAAGAGTCAGTCTCAGGGCGAGCGCTTCAAGGAGATGACGTCCATCAACGGCTCCCTGTCCAACCTCGGCATCGTCATCACCGCGCTGGCCAACAAGGTCAGTCGGCACGGGGCCGAGCTCAGAGACGCCGCGCCTCCAGATTCTTATCTCTTTTTTTCTCCGTGGCATGACTTTAATACGTATTTGGGTTTCCAGGAGAGCTACGTGCCGTACAGGAACTCCAAGCTGACCTATCTGCTGCAGGGGTGCCTGGGAGGAAACAGCAAAACGTGAGCTCCGTCGCCAAAACCGCCTCCGGACACGAGTGgCCTCGGCGCCCTGAGGCTGCGTTGTGTCCTTTGGGCTCGCAGCAGCAACTCATTGATCTACAGGAAGTGGTTTTATCCATTATTATGTCCCGCTTGCCAGTCAGTTCAAGCAAGAGGGTCCTGCTGGCGAGCAGCAGCAGCTCAGAGAATGGACAAGATGTTGAGCCTGCTCAGAAGAAGATTCGCAAAGACCCCGAGCCCGTCAAACCACAAGCAGCGGCTACGATCATCGGCGGCCGGCGGCTTCCTGCCGCAGCAACCAGGGCACCCATTTCACGGCCAGTCAGAGGCGTGGGCGCTGCCACCGTGGCGGTTGGTCCTTCCAGAGGCGTCCTGAAACAATCTATAGCTTCAACTGCAGCAAAGGGAGGCAACGCGAAACCAACTGTTGCACCGGCATGCCCCAAAACAGGTGTGGTCGGGGGCTCCAAGCGTCAACCATGGGACCTGAAGGGCAAGGTCATCGACATGGAGGGTAAGATCCGTAACTACCAGACCAAGGTCAAAGCGACCAGCCAGGAGAACGAGACGCTGAAAGGCACGATGGTCCAGAGTCAGTCGAGAGTCGCTGAAGTGGAGAAAACTGTAGCTCGTCAGAGGAGCCAGATCAGTGAGTATGAGGCGGAGCTGCAGGTGCTGTCAGGGGTGCGGGATGAGCTGGAGATGGTGTCCAGTGATAAGAGCACTCTTGAAAAGGAGCTCTCTAACTTTGAGAGCAAACACAAGGTCATGGAGACTCTGCGGGAGAGCCAGGAGACGGAGCTGCAAACTCTCAAGATGAAGCTGTCGGTCCAGGAGTCGACTCTGGCCCGCCTGCAGGTGACCCTCAGAGACACGGAGGAAGAGGTCAGCTCTCTCAAGGACACTGTGGTCCAGCAGAAGGACGAGCTGCACGCCGGGGAGATGGAGCGCCGGCGGCTCCACAACGCCATCCAGGAGCTGAAGGGCAACATTCGGGTCTTTTGCCGGGTGCGCCCTCTGGTGGAGGGAGGCCTCAGCAAGCACATCCAGCTGGCGGCCAGCGACAGCACCACGATAACGCTGGCTAAAACAGAGGAGTCCCACACAGGCAAAGCTGCTGACACTCAGAAGAACTACAACTTCAATTTTGACCGCGTGTTTGGCCCCCAGTCTTTGCAGCAGGAGGTCTTCGAGGAGATCTCGCTGCTGGTGCAGTCGGCGTTGGACGGCTACAACGTCTGCTGCTTCGCTTACGGCCAGACGGGCAGCGGCAAGACGTACACCATGGAGGGGGACGAGTGTGACGAGTCCAGAGGCGTCATTCCCAGAGCCGTGAAGCAGATCTTCAGAGCGGCAGAGAAACTAGCGGCGCAGGGCTGGGAGTTCACCTTCACGGCGAGCTTTGTGGAAATTTACAACGAGAGCCTGCGAGACCTCCTGTACTCCGGCAAGGCCAGCAAGAGGCCCGAGCACGAGATCCGGAAGTCCTCCAGCAACGAGGTGACCATCACCAACCTCACGTACGAGCGCGTCTGCAACGAGGATCAGGTACGGACCCGTCCACGGCAGACCTCCATGGGTAAACGACGATCCGTGTCATGTCCTCACGCCTCAATGCTCCGTTTGACACCCCCCACCCGCCAGGTTCTGGGCCTCATAATGTTGGCCAATCAGAATCGCTCCACGGCCCAGACGACCCAGAACGACCGCTCCTCCCGCTCCCATTCGGTGTTCCAGCTGGACATCGAGGGAGTGAACGTTGGCCGGGATGTCAAGTGCAAGTGTGCGTATACTCCCACGCATTACCCAGAATACAGCTCTGTGGTTCGGGTTGAGACGACTCATTTTAGAACCCGAGTTCTGCGTTTCTTTATCTCCGTTAAACCCGCTTGTGCGTTCATTTATTCGCTCAGCCACTCTGTGCCTGGTGGACTTGGCCGGCAGCGAGCGAATGCTGAAGAGTCAGTCTCAGGGCGAGCGCTTCAAGGAGATGACGTCCATCAACGGCTCCCTGTCCAACCTCGGCATCGTCATCACCGCGCTGGCCAACAAGGAGAGCTACGTGCCGTACAGGAACTCCAAGCTGACCTATCTGCTGCAGGGGTGCCTGGGAGGAAACAGCAAAACGTGAGCTCCGTCGCCAAAACCGCCTCCGGACACGAGTGgCCTCGGCGCCCTGAGGCTGCGTTGTGTCCTTTGGGCTCGCAGCAGCAACTCATTGATCTACAGGAAGTGGTTTTATCCATTATT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF16796	Microtub_bd	Microtubule binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR031852	Domain	Spindle pole body-associated protein Vik1/Cik1, microtubule binding domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47972	KINESIN-LIKE PROTEIN KLP-3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-