Gene detail

Detailed information of HK74SY85_g9216 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g9216	UNCHARACTERIZED	ctg62	222557	223926	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g9216

ATGGATAGAGATCATCAAGTACTAGCTTGGAAACAAACACATATCTCTAAACCAAAACCATATAACCCTGCATCACTAATGCCACAGGTATGAAGTTacaccatagaaaatacagccaatcagagagcagaattgccattgcatattccacggtattccacgcttccttcccacaatacgattcttttttaagttctagtatgataaatgagatatgcaatgggttctcgttgtataccatggaacatcctacttgtcacatgtattaataataataataatctttattaaagtgtcgatatactttagcattgctgctaattgaggacacAAAATAATGTAATACGTTGACAAAAAatatatatataattctaaaatatgctaaaatatattaatataaaaatacacctattatatatatactataaaaaattgctaataataatactataaaaattgctaataataactaattgctaataatgtattcattctattcattataatttcattcattcagttattctattcatttatttgcagatttattttatcaatcagtaaatgatttattATACATGGCAGTACAAACAATAGGGAATTCAGAGGTTATTTATAGGCATGGATATAACCATATTTTAACAGTACCAATTATTGCTTTTTTTAACTAATTTTCTTGAGGGGGAGGGGTCAGAAAGAACTTACTGATAACATTCGGTAGTAGGGTGGGGTGTGGCTTCTGAAGAAGAAAAAAGAAACATTAAGTAACATAAATGATGAACCCTAACAATGAAACTAACATGCTTTTGTTCCAGGTCCAAGAATTTGTTGACACACTTCCTCAAACAGATGTTTACATTGTGGAAATGCAGAGCCATAGAGTTGGCAAACATGCCGTTTCTCTCCTCCCATTTGTTATCCATCTGCGTATCATGGAAGCCATGCTCCACTGTCTGCTTACATCACCTGTTCTTCCACTAGACCCTCACTACACCTCAAAATACTTTAAACTACCAACTGGTCATTCACAGAAGAAGAAAGCTGCAGTCACTTTGGTTCAAAGTTTATTTCTTGAACGGAAAGAAGTTGCCTTAGAGGTTGAATGTGAGAACTTTTTAAAAGAGAAGTCAGGATTAGAAGGGAGTGAACTGCTGGTAGAGGGGCTTGTTGGTAGTCCCGACAAATCGAGCATGGATGAGCACACACCCAGTGCAACAAGTGCAACAACAGCATCTTCGATGCCTGATTTCAAACTGCAAATTTCTGAGAAACTCATTGAATATTTTCAGTGTTGTAAGAAGAAGGATGATTTAAGTGACTGCTTACTACAAGCCCTGGCATTTTACAATTTACTGTCTGAAAGTCAAGAGATGGATAGAGATCATCAAGTACTAGCTTGGAAACAAACACATATCTCTAAACCAAAACCATATAACCCTGCATCACTAATGCCACAGGTCCAAGAATTTGTTGACACACTTCCTCAAACAGATGTTTACATTGTGGAAATGCAGAGCCATAGAGTTGGCAAACATGCCGTTTCTCTCCTCCCATTTGTTATCCATCTGCGTATCATGGAAGCCATGCTCCACTGTCTGCTTACATCACCTGTTCTTCCACTAGACCCTCACTACACCTCAAAATACTTTAAACTACCAACTGGTCATTCACAGAAGAAGAAAGCTGCAGTCACTTTGGTTCAAAGTTTATTTCTTGAACGGAAAGAAGTTGCCTTAGAGGTTGAATGTGAGAACTTTTTAAAAGAGAAGTCAGGATTAGAAGGGAGTGAACTGCTGGTAGAGGGGCTTGTTGGTAGTCCCGACAAATCGAGCATGGATGAGCACACACCCAGTGCAACAAGTGCAACAACAGCATCTTCGATGCCTGATTTCAAACTGCAAATTTCTGAGAAACTCATTGAATATTTTCAGTGTTGTAAGAAGAAGGATGATTTAAGTGACTGCTTACTACAAGCCCTGGCATTTTACAATTTACTGTCTGAAAGTCAAGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09159	Ydc2-catalyt	Mitochondrial resolvase Ydc2 / RNA splicing MRS1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR015242	Domain	Mitochondrial resolvase Ydc2, catalytic	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR039150	Family	Transcription elongation factor, mitochondrial	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21053	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0006390	Biological Process	mitochondrial transcription	Interproscan
GO:0006392	Biological Process	transcription elongation by mitochondrial RNA polymerase	Interproscan
GO:0030337	Molecular Function	DNA polymerase processivity factor activity	Interproscan
GO:0042645	Cellular Component	mitochondrial nucleoid	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-