| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| HK74SY85_g6850 | THROMBOSPONDIN | ctg38 | 2952743 | 2979742 | + |
| CDS | |||||
| HK74SY85_g6850 | |||||
| Transcript |
| HK74SY85_g6850 |
| Protein |
| HK74SY85_g6850 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02412 | TSP_3 | Thrombospondin type 3 repeat | Domain | Interproscan |
| PF05735 | TSP_C | Thrombospondin C-terminal region | Family | Interproscan |
| PF07645 | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| PF12947 | EGF_3 | EGF domain | Domain | Interproscan |
| PF13385 | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR002126 | Domain | Cadherin-like | Interproscan |
| IPR003367 | Repeat | Thrombospondin, type 3-like repeat | Interproscan |
| IPR006558 | Domain | LamG-like jellyroll fold | Interproscan |
| IPR008859 | Domain | Thrombospondin, C-terminal | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR015919 | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR017897 | Repeat | Thrombospondin, type 3 repeat | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR024731 | Domain | EGF domain | Interproscan |
| IPR028974 | Homologous_superfamily | TSP type-3 repeat | Interproscan |
| IPR049883 | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10199 | THROMBOSPONDIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005576 | Cellular Component | extracellular region | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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