Detailed information of HK74SY85_g5843 in Paraphelliactis xishaensis sp. nov. Gene info
Gene IDAnnotationContigStartEndStrand
HK74SY85_g5843DNA LIGASE 1/3 FAMILY MEMBERctg3110649151070076-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01068DNA_ligase_A_MATP dependent DNA ligase domainDomainInterproscan
PF04679DNA_ligase_A_CATP dependent DNA ligase C terminal region FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000977FamilyDNA ligase, ATP-dependentInterproscan
IPR012309DomainDNA ligase, ATP-dependent, C-terminalInterproscan
IPR012310DomainDNA ligase, ATP-dependent, centralInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR016059Conserved_siteDNA ligase, ATP-dependent, conserved siteInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003909Molecular FunctionDNA ligase activityInterproscan
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0071897Biological ProcessDNA biosynthetic processInterproscan
GO:1903461Biological ProcessOkazaki fragment processing involved in mitotic DNA replicationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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