Gene detail

Detailed information of HK74SY85_g5787 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g5787	CONTACTIN 5	ctg31	356791	357951	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g5787

ATGTTTTGTTGTGTATTTGCAGGACCTCCTCGATTTCACTCAAAGCAGAAAAACGTTCTTGCTGAAAACAAAATGAACGTCGTTTTGACATGCGATGCACCAGGCTACCCACCTCCAAACAAATCATGGTCGAAGTTGTTTGGAGTTCTACCCGATAAAAGAACCAAAGTACTTGCTGATGGACACCTTAGAATCAACAGCGTCAGCAAAAACGATGAGGGCATTTACACCTGTACGGCAAAGAATACATTTGGACAAGGATCTATGCATACAAAAGTAACAGTACTGCCTGCACTTGTGTTCGATGTAAAACCCCCGTCAAGGTCTGGACACATCATTGGTGAACGCGTGATTCTTCCATGTCACGCTCCTGCTGCAGTAGAGGTAACGTGGTTGAAAAACAACAAGCCGTTAGATATTTCCATCACTGTCCATCCCGATGGAAGTATTGAAATTCCTACTTTCTCATCGGAACACGTCGGTGAATACGTGTGTATTGCTAGGAACTTTCATCGGTCGATTAAAACGACCACAAGTGTACAGGCCAGGTACCCCAAGTCTTGCAGTGAACTGAAATCAAAATTACATGCGTCACGCTCTGATAATTACGTCATTGATCCTGATGGCCAATCAGGAAAGCCTTCTTTCACGGTTTATTGTAACATGACTGACAGGGGAGGGGTTGGCGTGACTGTTGTCAGTCATGATAGCGAGGCAAGAACTCTTGTGGACGGTTGCCCTTACCCCCCAGGTTCTTGCAGGCGAGATGTTCTTTATGGAGTATGGATGGCTCAGCTGAAAAAACTGACTGAATTATCAACAAACTGTGAACAATTTATCAAGTTTGAATGCCTAAATGAAATAGAATTTATTGAAAGCGGATATGCTTGGTGGGTATCACGTGACGATGTACGTCAGGATTACTGGGGCGGGGCAACACCAGGTAGTAACAAGTGTGCCTGTGGCATGACCAATACGTGTCAGGACAACTCATATGGATGTAATTGTAACAACAATAATAAAAGATGGCGCAGTGACAGCGGTCTGTTGACTGATAAATCCACTCTACCTGTAATTCAGATAAGGCTGGCAGACACTGACGACTCTGATGAACAAGGTTACCACACCCTTGGCAAACTAAAATGTTACGGACAAACATCTATGTTTTGTTGTGTATTTGCAGGACCTCCTCGATTTCACTCAAAGCAGAAAAACGTTCTTGCTGAAAACAAAATGAACGTCGTTTTGACATGCGATGCACCAGGCTACCCACCTCCAAACAAATCATGGTCGAAGTTGTTTGGAGTTCTACCCGATAAAAGAACCAAAGTACTTGCTGATGGACACCTTAGAATCAACAGCGTCAGCAAAAACGATGAGGGCATTTACACCTGTACGGCAAAGAATACATTTGGACAAGGATCTATGCATACAAAAGTAACAGTACTGCCTGCACTTGTGTTCGATGTAAAACCCCCGTCAAGGTCTGGACACATCATTGGTGAACGCGTGATTCTTCCATGTCACGCTCCTGCTGCAGTAGAGGTAACGTGGTTGAAAAACAACAAGCCGTTAGATATTTCCATCACTGTCCATCCCGATGGAAGTATTGAAATTCCTACTTTCTCATCGGAACACGTCGGTGAATACGTGTGTATTGCTAGGAACTTTCATCGGTCGATTAAAACGACCACAAGTGTACAGGCCAGGTACCCCAAGTCTTGCAGTGAACTGAAATCAAAATTACATGCGTCACGCTCTGATAATTACGTCATTGATCCTGATGGCCAATCAGGAAAGCCTTCTTTCACGGTTTATTGTAACATGACTGACAGGGGAGGGGTTGGCGTGACTGTTGTCAGTCATGATAGCGAGGCAAGAACTCTTGTGGACGGTTGCCCTTACCCCCCAGGTTCTTGCAGGCGAGATGTTCTTTATGGAGTATGGATGGCTCAGCTGAAAAAACTGACTGAATTATCAACAAACTGTGAACAATTTATCAAGTTTGAATGCCTAAATGAAATAGAATTTATTGAAAGCGGATATGCTTGGTGGGTATCACGTGACGATGTACGTCAGGATTACTGGGGCGGGGCAACACCAGGTAGTAACAAGTGTGCCTGTGGCATGACCAATACGTGTCAGGACAACTCATATGGATGTAATTGTAACAACAATAATAAAAGATGGCGCAGTGACAGCGGTCTGTTGACTGATAAATCCACTCTACCTGTAATTCAGATAAGGCTGGCAGACACTGACGACTCTGATGAACAAGGTTACCACACCCTTGGCAAACTAAAATGTTACGGACAAACATCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050958	Family	Cell Adhesion and Cytoskeletal Organization	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45080	CONTACTIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0008046	Molecular Function	axon guidance receptor activity	Interproscan
GO:0030424	Cellular Component	axon	Interproscan
GO:0043025	Cellular Component	neuronal cell body	Interproscan
GO:0050808	Biological Process	synapse organization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-