Gene detail

Detailed information of HK74SY85_g465 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g465	DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED	ctg3	1760326	1762113	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g465

ATGGAGATAGAAAGTGAACATACTGCCCCAAATGACGACCTAAATAAAGAAACTAACATTTCACTTGACGAGAGTTTGAGTCAAGAGCATGAGACGCAACTAGACCATAGTGTAGAGTACCAAGCTGATGATGGCGTTACTTCTTTAGTGTCACAATTTGCTGGCTCTTCAAAGGTATAAAGGTTTTACCCATCATTTTGTTCATGTAAAGTCATCATTTACATATTACATGATATGATAGTGGTTATAATAACAACAATGATTTCCTACCACCAGGAGGATTTAGAAGTGATGCAGATGAATCTAGAGATGGAACAGAACTCACTACAGAGTGAACAAGCTCGTCATGAGAGAGCTGCAGCATCAGTGTCTAGTGAAATGTTTATTGAGAGTCAGGTGAATACTGTGAGGTTGTATGGTGTTTTATTCTCATGCCATGGTTTCCTTTCAGTCTCCTTTTTCCATGTTACACTCTTTTTTATTTGTCTCAGAActgtgtgtctgtatttatttgagtgtgtgtctgtctgtgtctctgttgatgtgtctgtctgtctgtcttaactctatgtctctatctttgatatgtatttcgatatgtctgtctgtgtaatctgtttgtttatacatttgtatgtctatgtgtctgtcttctgatctgtctgtccagttttcattgtacgatctgtccttgccttttgctgtctgtctgtctgtctgtcggttggtctgtctgtactctttgtctatcCCTCCTGCTCCCTCCCATATCTTTCCCACCCTTTATTTCCCATTTCATTTCCCATCCATTCATCTCTTTTCCACAGGAACTTCTTCGCCTGTTTGGTGTTCCATACTTAGTCAGTCCAATGGAAGCTGAGGCACAGTGCGCATTCCTTGACTTGACCAATCAAACCCATGGTACAATAACAGACGATAGTGATGTATTCTTGTTTGGTGGTAGAAGGGTTTACAAACATTTATTCAATCAGAATAAGCATCCTGAGTTATACACTAGTGAAGCTATCACTGGAAGACTAGGTAGGCTACTACTAACttagtaaataaactcctcctggcgactggtatatcggctgataattgtcagcggctgagagatggtccgacaaattaacagttgtttgagaagcgaagccccgagggcaactgtgatattttgagggttatattacatgatataaactgtgatattttaagggttataatacatgatatTATATGACTGAATACTAGAGGAAAAatagagcagatttcacatgactgtgaagactcaagacactgatcatgatgatgtcagttccgtgccgcgtatcaaaacatccAGTATTTTGGGAAGAGTGTAAAGAGAGAGGATTCAAGGAACTTGTGTTATCTTGTTTCAGCCTTGGATCGTTCAAAACTGATTAAACTAGCGTTGATAACAGGCAGCGACTACACAGAAGGCATACAAGGTAAGCTTTTatccatccatccatccatccatctacccatccatccatccatccattcacccatccatccaacccttttatttatttgatacatccatccattcatattttacttcccattcattcatctaaccatttatctatctatccactcctatattcaccattcattcattcattcattcattcattcatctttcaatttatttatttatttTCCTGATACCTGTGTTTGTTAGGCCTGGGTGCTGTTGGTGCTATGGAGGTGTTACACGAGTTTAATTCTAAAGGATTTGAAGCTCTTCAGAAATTTAAGATGGAGATAGAAAGTGAACATACTGCCCCAAATGACGACCTAAATAAAGAAACTAACATTTCACTTGACGAGAGTTTGAGTCAAGAGCATGAGACGCAACTAGACCATAGTGTAGAGTACCAAGCTGATGATGGCGTTACTTCTTTAGTGTCACAATTTGCTGGCTCTTCAAAGGAGGATTTAGAAGTGATGCAGATGAATCTAGAGATGGAACAGAACTCACTACAGAGTGAACAAGCTCGTCATGAGAGAGCTGCAGCATCAGTGTCTAGTGAAATGTTTATTGAGAGTCAGGAACTTCTTCGCCTGTTTGGTGTTCCATACTTAGTCAGTCCAATGGAAGCTGAGGCACAGTGCGCATTCCTTGACTTGACCAATCAAACCCATGGTACAATAACAGACGATAGTGATGTATTCTTGTTTGGTGGTAGAAGGGTTTACAAACATTTATTCAATCAGAATAAGCATCCTGAGTTATACACTAGTGAAGCTATCACTGGAAGACTAGCCTTGGATCGTTCAAAACTGATTAAACTAGCGTTGATAACAGGCAGCGACTACACAGAAGGCATACAAGGCCTGGGTGCTGTTGGTGCTATGGAGGTGTTACACGAGTTTAATTCTAAAGGATTTGAAGCTCTTCAGAAATTTAAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00867	XPG_I	XPG I-region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006084	Family	XPG/Rad2 endonuclease	Interproscan
IPR006086	Domain	XPG-I domain	Interproscan
IPR008918	Conserved_site	Helix-hairpin-helix motif, class 2	Interproscan
IPR029060	Homologous_superfamily	PIN-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16171	DNA REPAIR PROTEIN COMPLEMENTING XP-G CELLS-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003697	Molecular Function	single-stranded DNA binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0004520	Molecular Function	DNA endonuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-