| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| HK74SY85_g1171 | BECLIN 1 | ctg4 | 5539450 | 5544665 | + |
| CDS | |||||
| HK74SY85_g1171 | |||||
| Transcript |
| HK74SY85_g1171 |
| Protein |
| HK74SY85_g1171 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00538 | Linker_histone | linker histone H1 and H5 family | Domain | Interproscan |
| PF04111 | APG6 | Apg6 BARA domain | Domain | Interproscan |
| PF15285 | BH3 | Beclin-1 BH3 domain, Bcl-2-interacting | Domain | Interproscan |
| PF17675 | APG6_N | Apg6 coiled-coil region | Coiled-coil | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005818 | Domain | Linker histone H1/H5, domain H15 | Interproscan |
| IPR005819 | Family | Linker histone H1/H5 | Interproscan |
| IPR007243 | Family | Atg6/Beclin | Interproscan |
| IPR029318 | Domain | Beclin-1, BH3 domain | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR038274 | Homologous_superfamily | Atg6/Beclin C-terminal domain superfamily | Interproscan |
| IPR040455 | Domain | Atg6, BARA domain | Interproscan |
| IPR041691 | Domain | Atg6/beclin, coiled-coil domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12768 | BECLIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000045 | Biological Process | autophagosome assembly | Interproscan |
| GO:0000407 | Cellular Component | phagophore assembly site | Interproscan |
| GO:0000786 | Cellular Component | nucleosome | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006334 | Biological Process | nucleosome assembly | Interproscan |
| GO:0006914 | Biological Process | autophagy | Interproscan |
| GO:0006995 | Biological Process | cellular response to nitrogen starvation | Interproscan |
| GO:0030527 | Molecular Function | structural constituent of chromatin | Interproscan |
| GO:0034271 | Cellular Component | phosphatidylinositol 3-kinase complex, class III, type I | Interproscan |
| GO:0034272 | Cellular Component | phosphatidylinositol 3-kinase complex, class III, type II | Interproscan |
| GO:0045324 | Biological Process | late endosome to vacuole transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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