Gene detail

Detailed information of HK74SY85_g10978 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g10978	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	ctg74	982193	983245	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g10978

atgcctggaattaaaggaaatcccggtccttccttatcatctccatcagtactgatttcaccttctcatttgaatgtcaacgaaagtcaatctgccatcttacattgttttgcaagtggttatccacaacctgtggttgcgtggagtaaaaagaatggtttattagccagcaacagatcagtagttgatagtaacggtagacttgaaattaaacacgtcacaccggacgacgcaggaggctatcaatgtaaggcttctaatattcttggcaaaacacaaaacacagcaactcttgaagtgaacttccgtccacgactgaccttgaaaacaaaccccatctacaaaaagataggtgataacgttactctttctaagtgtcacgcaacaggacatcctaaaccaaaagtcacgtggtctaagtctattggtagtctgccaaatggtcgcactgttatcaaagatcacaacggacagctgaccttgttgaagtccaataaagacgactctggaatatacgtttgcaaagctgaaaaccgtcttggttctgctatgttagctatcatggtaattattgttcagctgcctgtgtttgttatcaagcctccttcaacacaaacaaccaaaactggtaaaaccgtaatccttaactgtactgccaatggtgaccctaaaccagttatcagctggagaaaagaaaatgatattcttcctgctggtagatttgaaataagagatggttccttgattataagaaactcgcaaacatcagattcaggtgtgtttgtgtgtactgccaggagtactgaagtttctcatgcggataccaagatcaccctgaatatacgcgatccaccaatagactgttcagagctctacaaatcaggagagagaggtaacggtgtctacatagtaaaacctgacgaccaggatgcttttgaagtctactgtgacatgacaactgacggtggggggtggacagtgattcaaaggagaaaagatggatcggtcgatttttatcgcaactggcaacaatacaaaactggatttggagacatgcctggaattaaaggaaatcccggtccttccttatcatctccatcagtactgatttcaccttctcatttgaatgtcaacgaaagtcaatctgccatcttacattgttttgcaagtggttatccacaacctgtggttgcgtggagtaaaaagaatggtttattagccagcaacagatcagtagttgatagtaacggtagacttgaaattaaacacgtcacaccggacgacgcaggaggctatcaatgtaaggcttctaatattcttggcaaaacacaaaacacagcaactcttgaagtgaacttccgtccacgactgaccttgaaaacaaaccccatctacaaaaagataggtgataacgttactctttctaagtgtcacgcaacaggacatcctaaaccaaaagtcacgtggtctaagtctattggtagtctgccaaatggtcgcactgttatcaaagatcacaacggacagctgaccttgttgaagtccaataaagacgactctggaatatacgtttgcaaagctgaaaaccgtcttggttctgctatgttagctatcatggtaattattgttcagctgcctgtgtttgttatcaagcctccttcaacacaaacaaccaaaactggtaaaaccgtaatccttaactgtactgccaatggtgaccctaaaccagttatcagctggagaaaagaaaatgatattcttcctgctggtagatttgaaataagagatggttccttgattataagaaactcgcaaacatcagattcaggtgtgtttgtgtgtactgccaggagtactgaagtttctcatgcggataccaagatcaccctgaatatacgcgatccaccaatagactgttcagagctctacaaatcaggagagagaggtaacggtgtctacatagtaaaacctgacgaccaggatgcttttgaagtctactgtgacatgacaactgacggtggggggtggacagtgattcaaaggagaaaagatggatcggtcgatttttatcgcaactggcaacaatacaaaactggatttggagac

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043005	Cellular Component	neuron projection	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-