Gene detail

Detailed information of HK74SY85_g10426 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g10426	3BP-1 RELATED RHOGAP	ctg67	474474	477937	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g10426

ATGTTAGAGTCAAGTAACCAATTGGGAGAAACATCACTTCTGGGGTAAGAAATTCAGATCAATATCAAATCAAGAAGCCACGAATCTGTACTTGTTACTAtagtaccccggacagaacaattcaggatttaattaaacggttacaactgtcgttattttcaactaaattccataaaaaacggcaatataaccaatcaggaaatttcacacatggaaaaattttaatatcccccattgttgatgttaagaccataaaaaaggcgggaaaatatgtgtgacctcgtctactttcgcgccaaaaattatcaactttattagaatgttaaaatgtttgtttttcagtcatcgatacattgtatcgtcatttacagtaaaaaataataattggtagtaacgatgtaataaaatgctttttaagaagggggatcttaacaactcgatcaatttcagttccgtaaaatccaagttgtaatggtcaaaaatgtgatatacgtcaaatggtcacaaatccaatccaaacaagctttttcaagcatttgttcaagctagtgtaaaattatggagagctccaggccaaccagctaataaatgtggtccacaaagctactacgaagcacaacaagcggtatcagatgcctggtcgtctgaagtttaacattaatgccttccaaggctggtatgcaattagagctacaggccaccatcttgcgagtcgatgggataaggattgtgtggcaaaaaagtctctaggcggcgacaatcaggagaagctgaagtgtttcgttggccatgaaagctttaagtatttgtcttttgtactgaccatattttaacattgtagtttaaaagaataaagcagaaataccaatttttttcagacatctgaactgaacaacgttgtatgacatgtgctttatgccagaaatcatgtgatttttagcattacgtcattggattatctatttttagacgtgttgtaaaaacacaaccaatagacttcttgtagagaaaaacatttctcatgtgtgaaatttcatattgtctctaagaaatatcaaattaagaaacatttataagtagtattaaagtttttgataaaaatatcaatcctgaattgttctgtccagggtactaTTTAATATACTGTCTATGTTGTAACCAGACAGGGGAGTCTGACTTGAGCGAAGTCTGCCCTACAGGGGTGTCCACTATAATTAACAAAGGAGTTAATTGTATAATAATCATTATCTATCCTGATATTAATCTAGTTTATATAATATTATAGTTCAGTACTACATggtgcaggagaagctgaactggatgtggccaaacagttgtgtgaatatgaaatgtcagtagagaagaatgtcctagcaccaatgacatcactactggaggtaacaattagcaaacagtgtactttataccccttaccttcatcagtgctccgtcctatggtatttaaaactacacttagattagattacacagattagagggaagtttaaacaaggatgtgagaatcatgatgacaggagtttaacAGTGAAGCCGCCTTGTTatacatacatggtacatacatacatagtttatttgataaagcaggttgaagaagtacaaataggagaatagcatgtggcagccatctggctgatgtggacctgctaTATTAATTAATGTTCACAAATTCATTTTCTTCTAAAGAATGAATTACCAAACCTCTCCCAAACCAAAAAGAAGCTATCCAAAGCTGCACTAGACATGGATACATGCAGATCACGATGGATGGCAGCAGTCAAAGCAGCACATGGCTCCAGCAAAGACATGCAGTCAGCTGCATTAAAAGCAGATTCCTTGAAAGATGAATATGATGATGGAATCATCAAGTTTGAAAGTTGTCAGGTTAGCTAAGGTTGCACAAAATTAAACACACCAAACAGTCTCTGCATGATAGAGGGATTCATAATTATATTAGTGTGCAAACCAACCAGTTATTTACTAAGCAATCATTGTAGAGTAATAGCTGGTGTGATGTCCTATTTTGGGAAGGGGATAGCCACGTTTCAATAAAATATTACCTCGGGCTCTCCTCTCCTTATATAATTAATTTTGAACAGGTTCCAGTTTTATGTCTACCTGTCCTTCATTATTGCAGTCTTGTTTTTCGTGGTTTCAGCCCACAACTTACTGACTGTTCTTATCATTGCTTTTAATTATCAGGATTATTTCACTACTGAAGCTCTAGAGTTTGTATCCAGAGAAGGAGAGTATGCAGACTGGATTATTAAAGTAAGTTATTTTTAATGCTTTAATTTTTAATGGTCTTTTAATAGCgataccattagtaatgataccattagtaatgattttgaaaatgttaaatctaaatccgtggcagtgatgggctggctttcagctagttttcgaaaatcggcacatactttacaaaacaaatctgtcgctagatgccatcttggatttcaccacaggaagcccaagtgactaaaaatttgcatTTGGCAATTACTTTATTCCACTTAGTCGCCTTTAGGCAACTAAACAATTTTTTTTATTTTCGAGCCATGCACTATCTacttaacaaacacttatcgaccacttaccaaccatttactaaccacttaccaaccatttaccaaccacttactGTCCAACCACTTATTGACCACTTACACAAATGTACTGCATGACCAACCGCTTATCGACCACTTACTGACCAGTACCATATGGTGTGGAATGTTTCTTTAATTTCTTCTGTAATAATAGTTTTATTGGTTTCAGAAGTAGCCATTCGAAACCAGGATATTGTATTTAAGATCATCATGATATTAATAAAATTTTTCAAAGAGATTATTGAAGATACGGCATATTTCGTAAAGCCTACCCACTCTACCAAGGAGGCTGCAATTCAGTTTACAATAAAGCATTCTATCTTGATTATTTGTACATGTAGTTCATGGAGGCACAGTTAGAGTATCACAGAACAGCATCAGAAATTTTAGGAAAAGTTCTACCCAGTATGAAGACAAAAGTTGGTAAGACGATAATGATTTGCTCACCAGCAAGTGAGGTAACTTACTAATTTTTGGGGAAAAAAAATCTTTTTTTTAACGAGCTTCCTTTTAATTCAACAACTTACATGTACATGTATATCAAACTGGTTAAAAACCGTTTTATGTCTTTGGTAACCTGTTTGAAAGTCATTTGGTAATAAATTGTTTTAGAGTAAAACTACTGGAGAATCATCACTTGGATAAATCTGTTGAAAACTGGTTTTAAACACTCACTAGTTAAATTCCATTAATAACAGTGGTTTTCACAATCCATTTTGGCAGTATTTATGTAACTTTTGGTTTAGCCTCTGTGGGCTAGCTACCTTTTTGTTAAAAAATGTGATGATTGTTTTCCAGATGAATCATCATTACGACCTGTGTTTGGCTGCCCACATGTTAGAGTCAAGTAACCAATTGGGAGAAACATCACTTCTGGGTTCAGTACTACATggtgcaggagaagctgaactggatgtggccaaacagttgtgtgaatatgaaatgtcagtagagaagaatgtcctagcaccaatgacatcactactggagAATGAATTACCAAACCTCTCCCAAACCAAAAAGAAGCTATCCAAAGCTGCACTAGACATGGATACATGCAGATCACGATGGATGGCAGCAGTCAAAGCAGCACATGGCTCCAGCAAAGACATGCAGTCAGCTGCATTAAAAGCAGATTCCTTGAAAGATGAATATGATGATGGAATCATCAAGTTTGAAAGTTGTCAGGATTATTTCACTACTGAAGCTCTAGAGTTTGTATCCAGAGAAGGAGAGTATGCAGACTGGATTATTAAATTCATGGAGGCACAGTTAGAGTATCACAGAACAGCATCAGAAATTTTAGGAAAAGTTCTACCCAGTATGAAGACAAAAGTTGGTAAGACGATAATGATTTGCTCACCAGCAAGTGAGATGAATCATCATTACGACCTGTGTTTGGCTGCCCAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03114	BAR	BAR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004148	Domain	BAR domain	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR047165	Family	Rho GTPase-activating protein 17/44/SH3BP1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14130	3BP-1 RELATED RHOGAP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0032956	Biological Process	regulation of actin cytoskeleton organization	Interproscan
GO:0035020	Biological Process	regulation of Rac protein signal transduction	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-