Detailed information of ENSZWYP00000004052.1 in Lamellibrachia columna Gene info
Gene IDAnnotationChromosomeStartEndStrand
ENSZWYP00000004052.1VACUOLAR PROTEIN SORTING VPS41chr11518944815229476+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00637ClathrinRegion in Clathrin and VPSRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR016902FamilyVacuolar protein sorting-associated protein 41Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045111FamilyVacuolar protein sorting-associated protein Vps41/Vps8Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12616VACUOLAR PROTEIN SORTING VPS41Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0009267Biological Processcellular response to starvationInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0030897Cellular ComponentHOPS complexInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan
GO:0046907Biological Processintracellular transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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