Gene detail

Detailed information of ENSZWYP00000000606.1 in Lamellibrachia columna Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSZWYP00000000606.1	LIN-9	chr11	5713424	5726261	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

ENSZWYT00000000606

GCGCCAACAAAATGGCGGATGATACGAGTGCGAGTGCGTTAGAAAGTTCTTCAGCCGAGGCATTGGTGACTATGAAGGAAGGAAAAGGACAAATGTTTCAAACAGGAACACCACCAAGGAGAGGACATCCGGTGAGAATCCGCAAGCCTAACCCAAGGATATTTGGTACGGGGGAGGAGGATATAACCAAGGTCACTCCCAGGCCCAAGAAACAGCCAAAGGTGGCTATACATAAAGCGATGCTGAGCAGTCCAGACAAGAAGGCCGCACAGTCGATTGGCGTACGACTGCGCAACCTGCTCAAACTGCCGAAAGCACACAAGTGGGTGTGTTATGAGTGGTTCTACTCAAACCTGGACAGGGCTTTGTTTGAGGGTGAGAATGACTTCTGTATCTGTCTGCGTGAGTCGTTTCCACAACTGAAGACGCGCAGTTTGACTCGCATGCAGTGGTGCAAGATCCGCCGACTGATGGGGAAGCCACGCAGGTGTTCTGCAGCGTTCTTCGCGGAGGAGCGGGGTGCCCTGCAACGCAAGCGGGAGAAACTACGTATCCTACAACAGAGGAAGATCTCAGACCTAGAGGACTTCAAGGACCTGCCTGAGGAGATCCCCATGCCCCTTGTCATAGGCACCAAGGTCACTGCACGTCTTCGTCGACCACAGGATGGTCTCTTCATTGGTGTCATTGATGCACTTGACACTGTCAACAATACATACCGGGTGACATTTGACAGACCTGGCTTGGGTACCTATTCAGTGCCTGACGTTGAAGTGTTGAGCAATGAAGTGCAGGAGACAATGCCCCTGTCAGCGTTCACCAGCAGGCAACGACCCCGCCAGACCATCTACAGCCCTGTCAGATTCGTCGCTGGTCTCAACTCGTTAGGCTTAGTTAGTGACAATGACCCATTACTAGGCAGTTCCCCCCTGAAGGAGAAGTGTCTGCCCAGTGAATACGGTGGCTTCCCGATCAAGTTCCTGGTTTTAGTTACGCGCCTCTCCAAGATCCTGGCCATCAAGAAGGAGTGCATCAGAGACCTGAAGGAGATGAATACACAGGCAGAGAAGATGGTGACTACTCCAGAGCTTCTCTCTAGCGACGACGTTTTTGGGAACATGAAGTCGTATGGGAAGCCGTTTGACACccactttcagcagcagtacgCCAGCACAGTACTTGAACTGGACCGGCTCAACAAAGATCTCAACGAGTACCTCATTGGCATACAACAGTACTATGATGAGATCCCTGACCACGGTGGGGCTCTCATGTCCCAGCCTACGGAGGTGTCGAGGAACTGTGATGCTGAGGCGGAGGAGATGGTAAAGAGAGCGAACCTCATACAGGGTCGTAGAATGGTGAAGAAGGATAGAATCCTCACTCTCATTGGAAAGCTCAATTCACTTCTTCTTCAAATCAGGACGTTTACTGAGAATGACATGCATTCGTTTGAGTTTGTGTCGTTGCAAGACACCCTCAATGATATCAAAGTGTCTGTCGACCCAAGCAATATCACAACCTTCGAGAACTGTGTGGAGATCCACGTGAAGCACATTGAGAGCGGCCTCAGTCAGATGGGCAACCTGCACGCCTTTGCGTCCGCACAGTCTGTCGCCACGCTCTAAATCACAAGCACATGCCAGCAGTGTCCTTCTAGGTCTTGCCCAAATGAAGATTTTTGTACAGTGACGAATCACAGATTTAAGCAAAGATTTGGTTATTTGTCACACAAAATGCAATTTCCCTTGAAAATAGCCTATTTGAAGTCTTTTTGACATGTCCAACTGAGAACTACGCCTACTACTGCCAGTAATTATACAGGACTGTGACAGGATATAGGTGTATATACAGTCCAACCTGTTCAagcgaccacctgcattaaAGCCATTGAGAAACCACCTCCcattaacgaccacagtcaactcaTCCTGAAGTACCACCTGTATATTATATAACCTGTATTAAGGGGAGGCACCCCAGGTGAAATGGCATTTTTTAACAAAAATACTCAAAACGTGTTTCCAatgtattctgatagctttgtatatttattatccataaagttcacttttataggaattacatacctctaaatcatgtttattcatggataaagcatgcctctttcaAATAATAAATCCCGTTTTTCAACCTTTGACGGGCGTTTGCAAAAAACTGTTTCCAATTTAGAAACATCATATCTCTGGTAATAATGATGCTACACCAATGAAGTTTTGATTGATGTACTCCTTATTATCTTCTTTATGCAACTACGAAGagatgttttgtttttgaaTTATTGGAGGAGTTACAGTGTTTCATAACTATGCTAtatttggtggccatctttATTTGTTTCCATGGAAATGGGGGTCTAGCAGAAAATTGTCAGTACATTTTTTTACTCAGACCCACACtaaaaacaattgcattagctatgcaataaaaaaatcttatccATCTGGGGTGTCTCCCCTTAAGACACCACTTTTTGACCTCCGTTGAGTGTTTGCTTAAGACGGGGTTGACTGTATATGCCTCTGAATTGTTTAATTGGCATATATATGTCTACTTGATGGTATTTCCTGTGTGCATTTTTAACTTCCAGTAGTAAACATACAGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06584	DIRP	DIRP	Family	Interproscan
PF19438	LIN9_C	LIN9 C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010561	Family	Protein LIN-9/Protein ALWAYS EARLY	Interproscan
IPR033471	Domain	DIRP domain	Interproscan
IPR045831	Domain	LIN-9, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21689	LIN-9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000003	Biological Process	obsolete reproduction	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0017053	Cellular Component	transcription repressor complex	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-