Gene detail

Detailed information of ENSZWYP00000000482.1 in Lamellibrachia columna Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSZWYP00000000482.1	N-ACETYLTRANSFERASE 10	chr11	42065623	42082782	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

ENSZWYT00000000482

CACAGATTCAAGCTCTACTGGTGTGCTACGAATCTTCCTGGTTAGCTGTACaattgaatgtatttatgactCAGGTGACATGTCAGTCTCTGTTAGCAGTGCAGGACTGCCTGGGTGAAGCACACAGGTGAAGCACACAGATGGGCTATGGGAGTCGTGCCCTCGAGATTCTTCAACAGTACTATGAAGGCAAGATCCCAAATCTGTCTGAGACAGAAAGCCAGCCAGTCCAGGAAGCACCCTCAGTCGAAAGTGATAGTGTCAGCCTGTTGGAAGAGCGCATAACCCCCAGGAAGAATTTGCCCCCACTGCTTCTGAAGCTTAGTGAACGACCCCCAGAGAAGCTCGACTACCTTGGAGTGTCATTCGGACTTACTGCAAACTTGCTCAAGTTCTGGAAGAGAAGTGGATATGTTCCAGTCTACCTACGACAGACTGCGAATGACCTCACTGGTGAACATTCCTGCATCATGCTGAAGATCCTGGATGAAGAAGATGAGGATGCAGGGAAAGACGAGGCTGGGCAGGGAGCAACAGGGAAGGCTGGGAAGGAGGAGTTGTGGCTCATGGCCTACTGGAAAGACTTCCGACGGCGCTTTGGTGCATTGTTGTCATACCAGTTCCGTACCTtcactccctccctcgctcTCAATCTACTGCAGCACCGACACTACCACACCGCACTGCAAGCAATGTCCAAGAAGGAGCTGGACACTTACTTCACCAAGTACGACCTGAAGAGACTGGAGCTCTACTCCCAGAACATGGTGGACTACCATCTGATCATGGACCTGCTGCCAACCATCAGTCGTCTCCACTTCCTGCACCACATCGACGTCCACCTGAGCGCCGCTCAGTCGGCAATCTTGCTGGGTCTTGGACTGCAACACAAGAAAGTGGAGCAGCTCGAGAAGGAGATTGACCTGCCTGCCAGCCAGATACTGGGTCTCTTCAATAGGTCCATCAGAAAGGTGGTCCAGTACTTCAGTCAGATCCAGGAGTGTGCAGTTGAGCAGGAGATGATGGCAAGACGAGATATCAACATGCAGCCAGTGAAACAGACCATGGATGACGAACTGAGTGAGGCAGCGAAGGAGGTGAGCGAGAAACAAAAGAAGGATCTGGATGTGTTGAAGGGTCTCGATCTGAGTCAGTTCTCAATCCGCGGCTCCGAGGAAGACTGGGACCACGCATTGTCCAGCGGCAAACCTGCTGGACTGGTCAGTGTCAAGAGTAACCTGAAGAAGAAGAGGACACCGGAAGTGGACTTGGACAAGTTGGTCGAGGGAGGAGACGGTGACGGCAAGAAGAGACGATCCTTCAAGAAGCACAAACACGGCAAACGTTGAGAGATGTGATCACCCTAGCCGGCAGGCTGGGAGAAGTAGAGTCGGGAAGGAAGGAAGCTTCCTGCAAAACACCAGCATTTAGTTGCTGCTAGAATTGGTTTTATGGAACAGCAAATACGTTTGATAATTTTTACTTTTAACTTGGCTATTGTCTCCTTTCTCCCAATATTGTAACAATTCACAATGATATCACTGTGGTTATTATGTCTTCCAGAGTCTGATATATGTAAATCTCCGTCAGTTGTTGTTTGTGCTGCCTCAAAATTGTTGTCCACTCCAAAGTAGTGATTCAATTAAGTGGATGGCATCTCATCAATCTTCATCGCAATGTCATTGACAGAAGTCTTCCTGTTGTCCGGGGTGTTAGGTATGTTCATCAGTGTGGTAGAATAACTTGTCTTCCCTGTGACACCCAGGAGTTTAGGGGGAGGGTGATCCTCAGCCGACAGTTCCCTGAAGTCAGGCAGTGGCTTGTCATAGTCGTCTCTTCCCACCAGCCAGTAAGTCTTCATGGCTGCCTTGCCCTGTAATACCAGTCATGCAGGATTAGGATGTTTCAACAAGAATTGTATCAGAAGTATGGTGGAGAATTTAGAATTAATATGGACACCTACGAGTAAGCTATGTTTAGTCATAATAACTTAATGTATTATGCTGTCAGTGTGAGCTGAAGTCAAATAATGAAGCAATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13718	GNAT_acetyltr_2	GNAT acetyltransferase 2	Family	Interproscan
PF13725	tRNA_bind_2	Possible tRNA binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000182	Domain	GNAT domain	Interproscan
IPR027992	Domain	Possible tRNA binding domain	Interproscan
IPR032672	Family	TmcA/NAT10/Kre33	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10925	N-ACETYLTRANSFERASE 10	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0008080	Molecular Function	N-acetyltransferase activity	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0030686	Cellular Component	90S preribosome	Interproscan
GO:1904812	Biological Process	rRNA acetylation involved in maturation of SSU-rRNA	Interproscan
GO:1990883	Molecular Function	rRNA cytidine N-acetyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-