Gene detail

Detailed information of ENSZWYP00000000403.1 in Lamellibrachia columna Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSZWYP00000000403.1	NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12	chr1	50197978	50315404	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSZWYT00000000403.1

ATGAAGAAGGCTGAAAGGGAAAGTCAGGCTTTGAAAGGGGAGGTTGGAGCTCTTGATGAGCGAGTTGCTAACCTGGAAGCAGCAAAGGGCCCCACCGAGGAAGAAATCATCAGAGCCGGAGATCGACTGAAGGAAGTGTTAAAAGAACAATACAGGGACATGGTGCTAGATAGTGAAGAACCTGCACCACTGGACAAGGTCTATGTGGAACTCCGCTTGCAAAAATCGGAACCAAAGAAACTCCCAGAGACCTTGAGTGAACGGGATGTCATTGCCATGGAGGAGCTCATGCAAGCAAGCCCAGTAGTGAAGTTGCCAGAGCTGTTTGACAAGATGACAGACAAATTCGCCCCCAAGAAAGTACTGATACGTGGCAGAGCAGGTGTCGGTAAATCAACACTTGTGAAGCATATTGCCAGTGAGTGGGCAGCAGGAGGACTTTGGAAGGATGTCTTCAGTCATGTCTTTTTGATTACGCTGAGGGAGCAGCCACAAGACACAAAGTTGACCCTCAGGCAGATGTTACTTGACAGACTGCCACTGTCACCAGTTGAGAAAGAAGCTGCCTTTGAAGAAATCTGCAGAAACCCCAAACGCTTGTTAATTTTGGGGGATGGTCTCGACGAGATACAGTACCACCACACATCCAGATGCCTTGCAAGTGATCGTGGTGCACCAACTGACCTGTCTCTGCTGCTGTCAAGTATTCTTGGCAACACCATGCTACCTGGAGCTACAGTTGTGGTAACTTCAAGGTCAACACACCTGCTACCATTGAGGGCATTTGGCCGCACTGTTGAACTCTATGGGGTCCCGAGAGACAGCATCATGGAGTATGTCAGCATGTTTAGTGCAGAGGATGAACAACTGCAGCAGTTCATTAGGAAGACATTTAAAGAAAAGAAGAATCTTCTGATGCTCTGGTACATCCCGATTCAGACCAAGTTTGTGTGCGAGACTCTGAAGGATTTACATGAACAAAGCAAGAAGGGAGAGGTGCCAGTCATCAGGACAATTACACAATTGTACCTGCAAGCAACGATTAACATGGCAAGGAAGATGCACCCGCGCTTGAAGTTCAGGGAAGTGGAACTGGGAGATGTACTAAAGGTCATAACAGAACCATTCAGGAAGTATGCTGAGTTGGCCAAACAATGTGTGATGTCAACTCCACTGAGAATCATCTTCTATCAAAACGATCTGGAAGAAGTTGGTCTTCGTGTGAACAGCCTTGAAGATATGGAGTGTGGAGTCATGACACGAGCAAGTAAGAGGGACGAACGTGTACCAACAATGACTAAACCATGTTGGTCATTTAATCATCTCACCCTCCAACAATATTTCTCTGCTATTGGGCTGCTTCAAGGATCAGCTGAAGACAGAGATAAACTTCTTGAGGATGTATTCTCAGTCCGCCAACAGGAGATTGTCATAAAGTTCATGTTGGGTCTAGTGGGAGACAGCCATAATGCTTGGTTCACGAAACAGCTCCTGTCATCACAAGTCTCACAGGACCTCGAAGACTTTGTGAAGAAACTGGCAGATGTGCTGAAAGATGACCCACTGAAAGTACTGGACATCTTATTTGAAAGTCAAGATCCAGATCTTGTGGACATCATCACAAGTAAGATCAAGTGCTGCCATGTGTTACCAGCAGAAATGCAAGCACTGTCCTGGGTGCTAAGACAAACCAAGTGCCCTGTTACAAACCTCGATTTGAGTGGCTGTCGTCTAGATGCACACACAATGAAGGAACTGAGTGTTGGTTTGGCAGCGAACACGTCCATCCAGAGCCTTGATTTGAGTGGCTGTCATCTAGATACACACACAACGAAGAAACTGAGTGTTGGATTGGCAAGGAACACATCCATCCAGAGCCTTCATTTGAGTGGCTGTCATCTAGATGCACACACAATGAAGGAACTGAGTGTTGGATTGGCAAGGAACACATCCATCCAGAGCCTTCATTTGAGTGGCTGTCATCTAGATGCACACACAATGAAGGAACTGAGTGTTGGATTGGCAAGGAACACATCCATCCAGAGCCTTCATTTGAGCTACTGTGCTCTAGATGCAGACACAACGAAGGAACTGAGTGTTGGATTGGCAGCGAACACATCTATCCAGAGCCTGAATTTGAGCTACTGTGCTCTAGATGTAGACACAACGAAGGAACTGACTGTTGGATTGGCAGCGAACACATCTATCCAGAGCCTGAATTTGAGCTGCTGTGATCTAGATGCACACACAATGAAGGAACTGAGTGTTGGATTGGCAGCGAACACGTCCATCCAGAACCTGAATTTGAGTGGCTGTCGTCTAGATGCAAACGCAATGAAGGAACTGAGTGTTGGTTTGGCAGCGAACACGTCCATCCAGAGCCTTGATTTGAGAGGCTGTCGTCTAGATGCAGACACAACGAAGGAACTGATTGTTGGATTGGCAGCGAACACGTCCTTCCAGAGCCTTGATTTGAGAGGCTGTCGTCTAGATGCAGACACAACGAAGGAACTGAGTGTTGGATTGACAGTGAACACGTCCATCCAGAGCCTTGATCTGAGTGGAAACAAAGCATTTGCTAGTGTCGAAGTTGGTCGTTCTCTTGGTGCCGTTCTTGCAGGAACCACGGCACTGCGTCAGCTACAGTTGGACCACTGCGATCTCACTCCAGGGTCATTGACTCCCATCACACACGGGCTGCTCCGTCAGGGAGGAACACGTCTGGAGAGTCTCAATCTGAGTGGAAACAAAGTGTTTGCTAGTGCCGAAGCTGGTTGTTCACTTGGTGCCGCTCTTGCAGCAATCCCGGCACTACGTCAACTAGAGTTGGACCACTGCGATCTCACTTCAGTGTCATTGATTCCCATCACACATGGGCTCCGTCAGGGAGGACGAAATCTGGAGAGTCTCAATCTGAGCTTCAATGAAGGATTGTTTTCATCATTCAAGGCGGGTCAACATCTAGGCAATGCTCTTGCATTAATGTCGCAACTGCAGGTGTTACAGTTGGACCACTGCGATCTCACTCCAGAGTCATTGATTCCCATCACACACGGGCTGCTCCATCATGGAGGAAAAAGTCTGAAGAGTCTCGAGTGTGCTGACAACTCCATCACAGATGATGTTGAGATGATGTTGAGAGACCTGATGATACGACTACCACAGTTAAAGATGAACCTTTGGAATAGTGGTGTGTCTGAGAAATGTTTCTACCAGCTGAATAAGGAATTTGGAGACAGAATTAGTATGCCTGCAGAACAACAGCCTGTGGCAGAAGCTGCAGAACAACAGCCTGCTGTTGAACAAACACCTGCTGAAGAACAACATCGTGTTTTAAAACGATTGTTTGCGGAAAAACGACATCCTGTTGTAAAACGACAGCCTGCAGAAGAACAACAGCTTGCTGTTGCAAAAGAACAACAACGTTCTGAAGAACAACAGCTTGGTGAAGAACGACAGCCTGTTGCAGAAGCAAACAAGCCATCGTCACCACACAACCTGCAGGTGGTGGAGGTCTGCACTGACTATATCTGTGTGACGTGGCAAGCTCCAATGAGTGACGGCAACTCACCCATCACTCGCTACGTTTTGGAGAAAGCCGATGCCAGAACGCCCAACTTCACAACTGCTGGCCACACCAGTACCGACACACTTGAGTTCAAAATGAGCCAACTCAACAAAGGCAAACATTACTTCCTACGAGTGTTTGCTGAGAATGTGATTGGACAGAGTGAACCGATCTGTCTGCAAGAACCCGTACGGCTGCCACTTGAGCAAGTCCAATGCGGCCGTGAGGATGAATCCAGAGAGTGTAATGACCGTCACTACTGGAACTTTGAAGTTGACCAAGAGGGTGCTACCCTTTGTGTGAGAAATATCTCGCTGACAATTCCACCGGGTGCACTTGAAGAA

Transcript

ENSZWYT00000000403

CAAGACCAACACATGATGCAACATCAGCTATGATGGCTAACTGGCGTTGATGCACATCAGTGATTAAGGCGATGATTTGAAACAGTTCATTCCACACAACtctcgaaaaatAGTTTCTCTCCGAATGAAGGAATCAGTCACATCTCGGCACAGCCGGGGAGACTGAAGGACTTCATGATGTTGTGAAGAAGACATCCACACCTCATCACAGCTAACTCTAGCAACTGACACAAAAAGAAGAATCAGAGGCAGAGAAAGAAGAAATGAAGAaggctgaaagggaaagtcagGCTTTGAAAGGGGAGGTTGGAGCTCTTGATGAGCGAGTTGCTAACCTGGAAGCAGCAAAGGGCCCCACCGAGGAAGAAATCATCAGAGCCGGAGATCGACTGAAGGAAGTGTTAAAAGAACAATACAGGGACATGGTGCTAGATAGTGAAGAACCTGCACCACTGGACAAGGTCTATGTGGAACTCCGCTTGCAAAAATCGGAACCAAAGAAACTCCCAGAGACCTTGAGTGAAcgggatgtcattgccatggaGGAGCTCATGCAAGCAAGCCCAGTAGTGAAGTTGCCAGAGCTGTTTGACAAGATGACAGACAAATTCGCCCCCAAGAAAGTACTGATACGTGGCAGAGCAGGTGTCGGTAAATCAACACTTGTGAAGCATATTGCCAGTGAGTGGGCAGCAGGAGGACTTTGGAAGGATGTCTTCAGTCATGTCTTTTTGATTACGCTGAGGGAGCAGCCACAAGACACAAAGTTGACCCTCAGGCAGATGTTACTTGACAGACTGCCACTGTCACCAGTTGAGAAAGAAGCTGCCTTTGAAGAAATCTGCAGAAACCCCAAACGCTTGTTAATTTTGGGGGATGGTCTCGACGAGATACAGTACCACCACACATCCAGATGCCTTGCAAGTGATCGTGGTGCACCAACTGACCTGTCTCTGCTGCTGTCAAGTATTCTTGGCAACACCATGCTACCTGGAGCTACAGTTGTGGTAACTTCAAGGTCAACACACCTGCTACCATTGAGGGCATTTGGCCGCACTGTTGAACTCTATGGGGTCCCGAGAGACAGCATCATGGAGTATGTCAGCATGTTTAGTGCAGAGGATGAACAACTGCAGCAGTTCATTAGGAAGACATTTAAAGAAAAGAAGAATCTTCTGATGCTCTGGTACATCCCGATTCAGACCAAGTTTGTGTGCGAGACTCTGAAGGATTTACATGAACAAAGCAAGAAGGGAGAGGTGCCAGTCATCAGGACAATTACACAATTGTACCTGCAAGCAACGATTAACATGGCAAGGAAGATGCACCCGCGCTTGAAGTTCAGGGAAGTGGAACTGGGAGATGTACTAAAGGTCATAACAGAACCATTCAGGAAGTATGCTGAGTTGGCCAAACAATGTGTGATGTCAACTCCACTGAGAATCATCTTCTATCAAAACGATCTGGAAGAAGTTGGTCTTCGTGTGAACAGCCTTGAAGATATGGAGTGTGGAGTCATGACACGAGCAAGTAAGAGGGACGAACGTGTACCAACAATGACTAAACCATGTTGGTCATTTAATCATCTCACCCTCCAACAATATTTCTCTGCTATTGGGCTGCTTCAAGGATCAGCTGAAGACAGAGATAAACTTCTTGAGGATGTATTCTCAGTCCGCCAACAGGAGATTGTCATAAAGTTCATGTTGGGTCTAGTGGGAGACAGCCATAATGCTTGGTTCACGAAACAGCTCCTGTCATCACAAGTCTCACAGGACCTCGAAGACTTTGTGAAGAAACTGGCAGATGTGCTGAAAGATGACCCACTGAAAGTACTGGACATCTTATTTGAAAGTCAAGATCCAGATCTTGTGGACATCATCACAAGTAAGATCAAGTGCTGCCATGTGTTACCAGCAGAAATGCAAGCACTGTCCTGGGTGCTAAGACAAACCAAGTGCCCTGTTACAAACCTCGAtttGAGTGGCTGTCGTCTAGATGCACACACAATGAAGGAACTGAGTGTTGGTTTGGCAGCGAACACGTCCATCCAGAGCCTTGAtttGAGTGGCTGTCATCTAGATACACACACAACGAAGAAACTGAGTGTTGGATTGGCAAGGAACACATCCATCCAGAGCCTTCAtttGAGTGGCTGTCATCTAGATGCACACACAATGAAGGAACTGAGTGTTGGATTGGCAAGGAACACATCCATCCAGAGCCTTCAtttGAGTGGCTGTCATCTAGATGCACACACAATGAAGGAACTGAGTGTTGGATTGGCAAGGAACACATCCATCCAGAGCCTTCAtttGAGCTACTGTGCTCTAGATGCAGACACAACGAAGGAACTGAGTGTTGGATTGGCAGCGAACACATCTATCCAGAGCCTGAAtttGAGCTACTGTGCTCTAGATGTAGACACAACGAAGGAACTGACTGTTGGATTGGCAGCGAACACATCTATCCAGAGCCTGAATTTGAGCTGCTGTGATCTAGATGCACACACAATGAAGGAACTGAGTGTTGGATTGGCAGCGAACACGTCCATCCAGAACCTGAAtttGAGTGGCTGTCGTCTAGATGCAAACGCAATGAAGGAACTGAGTGTTGGTTTGGCAGCGAACACGTCCATCCAGAGCCTTGAtttGAGAGGCTGTCGTCTAGATGCAGACACAACGAAGGAACTGATTGTTGGATTGGCAGCGAACACGTCCTTCCAGAGCCTTGAtttGAGAGGCTGTCGTCTAGATGCAGACACAACGAAGGAACTGAGTGTTGGATTGACAGTGAACACGTCCATCCAGAGCCTTGATCTGAGTGGAAACAAAGCATTTGCTAGTGTCGAAGTTGGTCGTTCTCTTGGTGCCGTTCTTGCAGGAACCACGGCACTGCGTCAGCTACAgtTGGACCACTGCGATCTCACTCCAGGGTCATTGACTCCCATCACACACGGGCTGCTCCGTCAGGGAGGAACACGTCTGGAGAGTCTCAATCTGAGTGGAAACAAAGTGTTTGCTAGTGCCGAAGCTGGTTGTTCACTTGGTGCCGCTCTTGCAGCAATCCCGGCACTACGTCAACTAGAgtTGGACCACTGCGATCTCACTTCAGTGTCATTGATTCCCATCACACATGGGCTCCGTCAGGGAGGACGAAATCTGGAGAGTCTCAATCTGAGCTTCAATGAAGGATTGTTTTCATCATTCAAGGCGGGTCAACATCTAGGCAATGCTCTTGCATTAATGTCGCAACTGCAGGTGTTACAgtTGGACCACTGCGATCTCACTCCAGAGTCATTGATTCCCATCACACACGGGCTGCTCCATCATGGAGGAAAAAGTCTGAAGAGTCTCGAGTGTGCTGACAACTCCATCACAGATGATGTTGAGATGATGTTGAGAGACCTGATGATACGACTACCACAGTTAAAGATGAACCTTTGGAATAGTGGTGTGTCTGAGAAATGTTTCTACCAGCTGAATAAGGAATTTGGAGACAGAATTAGTATGCCTGCAGAACAACAGCCTGTGGCAGAAGCTGCAGAACAACAGCCTGCTGTTGAACAAACACctgctgaagaacaacatcgtgTTTTAAAACGATTGTTTGCGGAAAAACGACATCCTGTTGTAAAACGACAGCCTGCAGAAGAACAACAGCTTGCTGTTGCAAAAGAACAACAACGTTCTGAAGAACAACAGCTTGGTGAAGAACGACAGCCTGTTGCAGAAGCAAaCAAGCCATCGTCACCACACAACCTGCAGGTGGTGGAGGTCTGCACTGACTATATCTGTGTGACGTGGCAAGCTCCAATGAGTGACGGCAACTCACCCATCACTCGCTACGTTTTGGAGAAAGCCGATGCCAGAACGCCCAACTTCACAACTGCTGGCCACACCAGTACCGACACACTTGAGTTCAAAATGAGCCAACTCAACAAAGGCAAACATTACTTCCTACGAGTGTTTGCTGAGAATGTGATTGGACAGAGTGAACCGATCTGTCTGCAAGAACCCGTACGGCTGCCACTTGAGCAAGTCCAATGCGGCCGTGAGGATGAATCCAGAGAGTGTAATGACCGTCACTACTGGAACTTTGAAGTTGACCAAGAGGGTGCTACCCTTTGTGTGAGAAATATCTCGCTGACAATTCCACCGGGTGCACTTGAAGAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF05729	NACHT	NACHT domain	Domain	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR050637	Family	NLRP family, innate immunity and inflammation regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45690	NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-