Gene detail

Detailed information of ENSZWYP00000000019.1 in Lamellibrachia columna Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSZWYP00000000019.1	NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12	chr1	49888793	49982682	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSZWYT00000000019.1

ATGGATACCAATCGGAGTAAACCTTCCCAGAACCCTGAGAGGGTGTTGGCCAGGGACACCTCTAGGGTTAGGGTGCCACAAAAGAGACAGTCTGACACCTCTGACAGTCTACAGGCAGCCAGCGGTGGTGGCAAGATGCTGAAGCAGGACTTTGAGTCTGAGACCCCTTGTACAAGCTATGGAAAAAAACATGCCAGAAAAAAATATCGTTTTACCAGAAGATCTCAGGACAACATGCAACAACCACTGGACGGTGAACAGTGGCGACAGAACACTGAGAAGCAACAGAGAGGAAAACAGCATGCTACAGACCTGAAAGTAGAACAAGGAAGGCAGAACTTACAGAGAGTGGAACGACAAGTTCACGGCCTTGATTCCCGATTGACTGTAGCTGAAGAGAAACTGAAGAAAGAATTACGAAAGATGTACAACAGGTCGACTGTTCTGGTCCAAGACACAGTCAATGCAGAATGTTGCAGTGAAGTCCCGCTTGATGAGATGTTTGTCGAATTACGACTGCAGAAGTCTGCTACTACAAAACTCCCAGAATCACTTAGTTATCGTGATGTGGAGGAAATGCAGCGAAGCATGCAGTCAAGTAAACCAATTGAAACGTCACAACTCTTTGATAAGCTTCATGACAGATGTGCCCCCAGAAAGATCCTGATGCTGGGCAAAGCGGGCATTGGAAAGACGACCCTCATTAAGCAGATTGCATCACAGTGGGCTAAGAAAGAGCTCTGGAAGCATGTCGAGTACTTATTTGTCATCACCTTACGACAACTGCGGCAAGACAGGAAGTTGACACTTGGAGAACTCCTGCTGGATGGACTGTCACTGACTAAAGAAGAAAAGACTGCAGCACTTAACCACCTCCGTGAAAACGCTTCGACAGTGATGATCATAGCAGAAGGTTGGGATGAAATTGCGTACACTGGTGAAGAAGACATTGAACGTGATGACACGAAGGCAGTTGACCTGAACATGATACTCTCAAGTATTTTGAACAACGTCATGCTGCCTGGAGCAAAGGTGTTAATTACGTCTCGTCCAAATGACAACATTCCTGTGTGTGACCGCTCTTTCGAACTGTATGGCTTCACCCAAGCAAACATCGACATGTACATTCATAAATTCAGTGGACAAGACACTGAATTAGAACAGTTCATCAGGCGTTATCTCCAGAGCAACGTAAACATTGCAACGATGTGTTACGTACCCGTGCACACAAACTTTGTCTGTGCATGTCTTAAAGACATGCGTTCATCCTCCCGCATTGATGACACGCCAACAGTAAATACCATGACACACCTGTATATCTTTGCAGTAATAAACCTTACAAGGAAACTACACCCTTCTTTGAAGGGCAGCAAAACAGGAATAGATGAAAGGACGTTCCTTGCCATGGTGGGTGATTCTTTGAAGAGGCACGCAGAGTTAGCAAAGTACTGCACACTGTCAACTCCACAACGAATCATCATGTATGAAGGAGACCTTGATCGGTTTCACATAAGTGACAAAGACAAACACACAGGGTTCCTGGCGCAATCTATGACGAGAAGCAGCATTCAAGGTTTGAAAAGAAGGTGTTGGTTTTTCCATCACTTGACAATGCAAGAAATGTTTGCTGCTGTGGGGTTGTTGAGGGGACCACATGAAGCACTTCTGGAGCTGATTGAGAATGAAACCTCAGTCTGCCAACATGAGGTGTTGATCAGATTTGTTGTGGGTCTCTTGTGCGACCGACACAGTGCACATTTCATGGATTTACTGGAGTCCGCCAAGGATCAGTTGGACCCTCGGACTGTCATTGAGAAACTGGCTCGTGTGTTTGACCCACTGCAACTCATTACTGCAATCTACGAGTCTCAATGCCCGGATCTAACAGACCTTGTACCGAGAGAGATCGAATCCAACAACGTGTTCCCAACAGAAATGATGGCGTTGTCATGGGTTTTAATACAACACGAGTGTCATGTCATCAGTCTCAACTTGTCTAGATCAAGTTTAGACATCCACCTGGTGAGGCAACTGTGTGATGGGCTGAGAAAGAACACATCTCTCAAGTTGTTGAATTTGAGCAACTGTTATCTAGGTGCTGATGCAACGAAGGAACTGAGTGTTGTGTTGGCAGAGAACAGGTCCATCCAGAGCCTGAATTTGAGCTACTGTGATCTAGATGCTGGTGCAACGAAGGAACTGAGTGTTGGGTTGGCAACGAACACATCCATCCAGAGCCTGGATTTGAGCTGCTGTGATCTAGATGCTGATGCAATGAAGGAACTGAGTATTGGGTTGGCAGCGAACACGTCCATCCAGAGCCTGAATCTGAGTGGAAACAAAGTGTTTGCTAGTGTCAAGGCTGGTCGTTCACTTGGTGCCGCTCTTGCAGCAACCTCGACACTGCGTCAACTAGATTTGGATGGATGTGGACTCATTTCGAAATCATTTGAACACATTGCGGATGGTCTCAGGGCAGGTTGCCCAATGCTGATGCACTTCAAGTGTGCTGACAACTCCATCAAAGATGATGTTGAGATGATGTTGAGAGACCTGATGACACAACTACCACAGTTAAGGATGAGTCTTTGGAATAGTGGTGTGTCTGCGAAATGTTTCTACCGGCTGAATGAGAAATTTGGAGACAGAAGTAGTATGCACACAGAGAAGGTGGCACCCACATTCAAGACACCATGTAAATGGGATAGATTACCCCGGATGAATAAGGACCATACCGAGAAGCTGAGCTGGCTATTTGAACTGCAGGAGAAGCAGCCAGATAAATTGGTACAGGATCTTCAACAAATCTGCTTGTGCACAGAAGACAAATTCAAGATTGGTAAAGGATCGGTTGTGTTGGGTTGCCCTCAAAGCGTGGGGAAGTGGAAGTTCGGCACAGAAGTATACATCGGTCTCATCCGAGATGGACGGGAGACCGCAGTAAAGAAAGTGATGCATTCATCCTACAAGCTGGTAAAAGCGGAAGTGAAGACTCTAGTGAAACTGCGCCATCATCCTAACATTGTGGATTACATGATGGTAGACAAAGACAAGGACAAGGACAGTTACATTGCTACAGAACTCTGTGATTTCACCGTCAAGCAATGGCTCGAGCAGACAGAGGTGAAAGAGCTGTCTGAGAAAGACAGGAGCAAGAAAGTGACTCAGTTGGTGGAAGGCTTATTACGTGGACTTGACTACATGCATACTTCAAAACCATGCAAGATTCTGCACAGAGATATCAAGCCACAGAACATATTTGTGGTTTCTGCCAATGGAGAAGAGTGCATGAAGATCGGAGACTTTGATTTGAGTCATGCTTTTGACCCAGATATGAGTACCATGGAGATAACTGGCACAGGAACACTGTTGTGGATGCCAAAAGAGGTGCTTGAACAGATATATGCCGAGAAGACACCCATCCACTACAAAACCTGTGGTGACATACAGTCAGCTGGGATGGTGTGCTTCTATATGATGTCTGGAGGTATTCACACCTATGCACCAGATGGTAGACTCGATAAGGCACAAACCAGGATTATGGATGGAGACTATGACCTGTCAGCTGTTGACGACCCAGTGGCGTGTGACCTCGTCAAGCACATGCTGGCACCTAAACCAAGAGAGCGACCATCTGCTGGAGAGCTGCTCAGACACCCTTACTTCTGGTATGACGAGAAACGATGTGGCTTTCTGGCTAGCACTGGAAACTTGTTTGAGGTAGAAAAGAGTCATCTTGGACCCAGAACGCGCTTCACACAGGAAATTGACGACATGGATGATGAAGTGTTCCCAAATCACCACGATTGGATTTTCCTTTGTGACAAGATGAAGATGTTCTTAGATGGACAGTACGAGACAGACAAGACTTGTCTGAAACGTTTAAATGACCCACTCTATGTGGAATCAATGTGCAAACTCCTGAGAACCATCAGGAACTTCACTCAGCATAAACAACTCTCACCTGAAGCAGAACGTGAAATTGGGACCTCCGACAAACTGTATTGCTTCGTAAACGATGCACTGCCAAAGTTGTTTATCACCACCTACAAGTTGATCAAGTCA

Transcript

ENSZWYT00000000019

ACATCCACACCTCATCACAGCTAACTCTAGCAACTGACACATAAAGAAGAATCAGAGACAGAAAGATTTCCTATGGATACCAATCGGAGTAAACCTTCCCAGAACCCTGAGAGGGTGTTGGCCAGGGACACCTCTAGGGTTAGGGTGCCACAAAAGAGACAGTCTGACACCTCTGACAGTCTACAGGCAGCCAGCGGTGGTGGCAAGATGCTGAAGCAGGACTTTGAGTCTGAGACCCCTTGTACAAGCTATGGAAAAAAACATGCCAGAAAAAAATATCGTTTTACCAGAAGATCTCAGGACAACATGCAACAACCACTGGACGGTGAACAGTGGCGACAGAACACTGAGAAGCAACAGAGAGGAAAACAGCATGCTACAGACCTGAAAGTAGAACAAGGAAGGCAGAACTTACAGAGAGTGGAACGACAAGTTCACGGCCTTGATTCCCGATTGACTGTAGCTGAAGAGAAACTGAAGAAAGAATTACGAAAGATGTACAACAGGTCGACTGTTCTGGTCCAAGACACAGTCAATGCAGAATGTTGCAGTGAAGTCCCGCTTGATGAGATGTTTGTCGAATTACGACTGCAGAAGTCTGCTACTACAAAACTCCCAGAATCACTTAGTTATCGTGATGTGGAGGAAATGCAGCGAAGCATGCAGTCAAGTAAACCAATTGAAACGTCACAACTCTTTGATAAGCTTCATGACAGATGTGCCCCCAGAAAGATCCTGATGCTGGGCAAAGCGGGCATTGGAAAGACGACCCTCATTAAGCAGATTGCATCACAGTGGGCTAAGAAAGAGCTCTGGAAGCATGTCGAGTACTTATTTGTCATCACCTTACGACAACTGCGGCAAGACAGGAAGTTGACACTTGGAGAACTCCTGCTGGATGGACTGTCACTGACTAAAGAAGAAAAGACTGCAGCACTTAACCACCTCCGTGAAAACGCTTCGACAGTGATGATCATAGCAGAAGGTTGGGATGAAATTGCGTACACTGGTGAAGAAGACATTGAACGTGATGACACGAAGGCAGTTGACCTGAACATGATACTCTCAAGTATTTTGAACAACGTCATGCTGCCTGGAGCAAAGGTGTTAATTACGTCTCGTCCAAATGACAACATTCCTGTGTGTGACCGCTCTTTCGAACTGTATGGCTTCACCCAAGCAAACATCGACATGTACATTCATAAATTCAGTGGACAAGACACTGAATTAGAACAGTTCATCAGGCGTTATCTCCAGAGCAACGTAAACATTGCAACGATGTGTTACGTACCCGTGCACACAAACTTTGTCTGTGCATGTCTTAAAGACATGCGTTCATCCTCCCGCATTGATGACACGCCAACAGTAAATACCATGACACACCTGTATATCTTTGCAGTAATAAACCTTACAAGGAAACTACACCCTTCTTTGAAGGGCAGCAAAACAGGAATAGATGAAAGGACGTTCCTTGCCATGGTGGGTGATTCTTTGAAGAGGCACGCAGAGTtagcaaagtactgcacactgTCAACTCCACAACGAATCATCATGTATGAAGGAGACCTTGATCGGTTTCACATAAGTGACAAAGACAAACACACAGGGTTCCTGGCGCAATCTATGACGAGAAGCAGCATTCAAGGTTTGAAAAGAAGGTGTTGGTTTTTCCATCACTTGACAATGCAAGAAATGTTTGCTGCTGTGGGGTTGTTGAGGGGACCACATGAAGCACTTCTGGAGCTGATTGAGAATGAAACCTCAGTCTGCCAACATGAGGTGTTGATCAGATTTGTTGTGGGTCTCTTGTGCGACCGACACAGTGCACATTTCATGGATTTACTGGAGTCCGCCAAGGATCAGTTGGACCCTCGGACTGTCATTGAGAAACTGGCTCGTGTGTTTGACCCACTGCAACTCATTACTGCAATCTACGAGTCTCAATGCCCGGATCTAACAGACCTTGTACCGAGAGAGATCGAATCCAACAACGTGTTCCCAACAGAAATGATGGCGTTGTCATGGGTTTTAATACAACACGAGTGTCATGTCATCAGTCTCAACTTGTCTAGATCAAGTTTAGACATCCACCTGGTGAGGCAACTGTGTGATGGGCTGAGAAAGAACACATCTCTCAAGTTGTTGAAtttGAGCAACTGTTATCTAGGTGCTGATGCAACGAAGGAACTGAGTGTTGTGTTGGCAGAGAACAGGTCCATCCAGAGCCTGAAtttgAGCTACTGTGATCTAGATGCTGGTGCAACGAAGGAACTGAGTGTTGGGTTGGCAACGAACACATCCATCCAGAGCCTGGAtttGAGCTGCTGTGATCTAGATGCTGATGCAATGAAGGAACTGAGTATTGGGTTGGCAGCGAACACGTCCATCCAGAGCCTGAATCTGAGTGGAAACAAAGTGTTTGCTAGTGTCAAGGCTGGTCGTTCACTTGGTGCCGCTCTTGCAGCAACCTCGACACTGCGTCAACTAGATTTGGATGGATGTGGACTCATTTCGAAATCATTTGAACACATTGCGGATGGTCTCAGGGCAGGTTGCCCAATGCTGATGCACTTCAAGTGTGCTGACAACTCCATCAAAGATGATGTTGAGATGATGTTGAGAGACCTGATGACACAACTACCACAGTTAAGGATGAGTCTTTGGAATAGTGGTGTGTCTGCGAAATGTTTCTACCGGCTGAATGAGAAATTTGGAGACAGAAGTAGTATGCACACAGAGAAGGTGGCACCCACATTCAAGACACCATGTAAATGGGATAGATTACCCCGGATGAATAAGGACCATACCGAGAAGCTGAGCTGGCTATTTGAACTGCAGGAGAAGCAGCCAGATAAATTGGTACAGGATCTTCAACAAATCTGCTTGTGCACAGAAGACAAATTCAAGATTGGTAAAGGATCGGTTGTGTTGGGTTGCCCTCAAAGCGTGGGGAAGTGGAAGTTCGGCACAGAAGTATACATCGGTCTCATCCGAGATGGACGGGAGACCGCAGTAAAGAAAGTGATGCATTCATCCTACAAGCTGGTAAAAGCGGAAGTGAAGACTCTAGTGAAACTGCGCCATCATCCTAACATTGTGGATTACATGATGGTAGACAAAGACAAGGACAAGGACAGTTACATTGCTACAGAACTCTGTGATTTCACCGTCAAGCAATGGCTCGAGCAGACAGAGGTGAAAGAGCTGTCTGAGAAAGACAGGAGCAAGAAAGTGACTCAGTTGGTGGAAGGCTTATTACGTGGACTTGACTACATGCATACTTCAAAACCATGCAAGATTCTGCACAGAGATATCAAGCCACAGAACATATTTGTGGTTTCTGCCAATGGAGAAGAGTGCATGAAGATCGGAGACTTTGATTTGAGTCATGCTTTTGACCCAGATATGAGTACCATGGAGATAACTGGCACAGGAACACTGTTGTGGATGCCAAAAGAGGTGCTTGAACAGATATATGCCGAGAAGACACCCATCCACTACAAAACCTGTGGTGACATACAGTCAGCTGGGATGGTGTGCTTCTATATGATGTCTGGAGGTATTCACACCTATGCACCAGATGGTAGACTCGATAAGGCACAAACCAGGATTATGGATGGAGACTATGACCTGTCAGCTGTTGACGACCCAGTGGCGTGTGACCTCGTCAAGCACATGCTGGCACCTAAACCAAGAGAGCGACCATCTGCTGGAGAGCTGCTCAGACACCCTTACTTCTGGTATGACGAGAAACGATGTGGCTTTCTGGCTAGCACTGGAAACTTGTTTGAGGTAGAAAAGAGTCATCTTGGACCCAGAACGCGCTTCACACAGGAAATTGACGACATGGATGATGAAGTGTTCCCAAATCACCACGATTGGATTTTCCTTTGTGACAAGATGAAGATGTTCTTAGATGGACAGTACGAGACAGACAAGACTTGTCTGAAACGTTTAAATGACCCACTCTATGTGGAATCAATGTGCAAACTCCTGAGAACCATCAGGAACTTCACTCAGCATAAACAACTCTCACCTGAAGCAGAACGTGAAATTGGGACCTCCGACAAACTGTATTGCTTCGTAAACGATGCACTGCCAaagttgtttatcaccaccTACAAGTTGATCAAGTCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF05729	NACHT	NACHT domain	Domain	Interproscan
PF06479	Ribonuc_2-5A	Ribonuclease 2-5A	Family	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR010513	Domain	KEN domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR038357	Homologous_superfamily	KEN domain superfamily	Interproscan
IPR050637	Family	NLRP family, innate immunity and inflammation regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45690	NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0050727	Biological Process	regulation of inflammatory response	Interproscan
GO:0050729	Biological Process	positive regulation of inflammatory response	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-