Detailed information of ENSWXWP00000045349.1 in Bathymodiolus septemdierum Gene info
Gene IDAnnotationChromosomeStartEndStrand
ENSWXWP00000045349.1BRG-1 ASSOCIATED FACTOR 250 BAF25094800850948061390+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyARID
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF02172KIXKIX domainDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003101DomainCoactivator CBP, KIX domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR021906FamilySWI/SNF-like complex subunit BAF250/OsaInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR036529Homologous_superfamilyCoactivator CBP, KIX domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12656BRG-1 ASSOCIATED FACTOR 250 BAF250Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016514Cellular ComponentSWI/SNF complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035060Cellular Componentbrahma complexInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0071565Cellular ComponentnBAF complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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