Gene detail

Detailed information of ENSWXWP00000033828.1 in Bathymodiolus septemdierum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSWXWP00000033828.1	MONOCARBOXYLATE TRANSPORTER	6	56773386	56833509	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSWXWP00000033828

ATGTCTGTATTGTCAAACTATGCTTCTAGATTCTCTTGTAAACTTTTAGAAATTGAAAATGTTAGTCATGTTCTTGTGTTATTTGTTTATACGTGTGTTGCACTTACAATTTCAGAGCAGCCATTCTCTTTCTTGGTAGTTTTAGACTTTGAGTCAACATGTTGGCAGGATGGTAAATTCAGAACTCAGGAAATAATTGAATTTCCTGCAGTATTGTTGAATACCTTGACAGGAGAGATTGAAAGTGAGTTTCAGTTTTATGTACAACCACAGGAACAACCAGTTCTTAGTGAGTTCTGTAAGCAGCTTACTGGAATCACCCAGgaacAAGTTGATGATGGCATAccattacatttatgtattagaaagTTTGCTCGTTGGCTGGAAAATTTAAAAGGCAGCAAAGGTGTGGTGTTTACACAAACAGCAGAAAACTGTAACCTGGCAACTATTGTCACATGGTCAGATTGGGATCTAGGTGTTTGTTTATATAATGAAGGTAGAAGAAAACAAATTGTTACACCAGCACAGCTAAACAGTTGGATAGATCTAAGGGCAACATACAGGAAATTCTACAGTAGGAAACCAAATGGATTAAGTGGAGCCTTGAAGGACGTTGGGATTGAGTTTGAAGGACGAGAACATTCAGGTCTTCATGATTCCAGAAATACTGCAAAGCTTGCCTACAGAATGATAAAAGATGGCTGTATACTGAACATAACAAAGACACTGAAGGGGAATTATTTACCATCAAGAACCATTAAACAACTTACACCATCTAAAAGTCCACTacacaaaagaagaagacaaagtGAGCGAGTTAAAGGTGATGAAGATCCTGATGATGAAAGTGTTTGTAGACAAGAAATTGACAACTTATTAATTCAGGATGCAGTGAGAACTCCAGATGGTAAAAGGAAAAGTAGAGTTCTGTTACCTAGTCCAAATTCTAGCAAAAAAGTGACAAAGGAAAAAATACCTGCCAAATGTTCTAAATTGACAAAGATAACAGCTAAGCGGATATTGGCTGGAAAATTTAATCCATCTGATATATATGTTGATCCAGTTAACATTAGTGATGCTTACATTAATGGATCGTCATCCACCGTCCACAACAAACTGGTGGATATCAGTAATAATATTCATTTTACACAGAAAACATCAAAGCCGGTTACACCaacaaagggacataactctaagATAAATTTGATGGATAAATCAAGAACAGATCTCACTGTAATAAAAGCCTGTAATGACTTGAAGAACTCCAGATGTTTAGTAGCCAGACCTTTGAAACCACCTACAGATATACCTGGATATAAAACCCCATCAAACACTACTTTTCAATCATCCACAAATCCATCTAGAATGAAGGGGACTCCACCATTGTGTAACTGTGGTAAAAGGTCAAAGAGGAGGATGGTCCAGACACCAGGACCAAATCTAGGACGATTCTTCTTTACTTGTGGTTCTTCATATTATAATAGTACAGACGGAAAGAATGCTTGTGGTTTCTTCAAGTGGGAAACACCTGTTAGAAGCAGGTGTCAGAGTTTTACACAGAATGGAACACTATCTAAACCTTTTGTACCAGTATTTAATAATTGTACTCCATTGATAAATGCTACATTAAAGAAAAATTTGGGTTGTACAATATTAACTGAACACTATTCCGACAAAAGTTTCTCTCCTTCAACTTCTGAAGGAAGTTTGTCGAGTGAATCAACGATCTCCGTACCACCGGCTTTAGATGGCGGGTATGGATGGGTTATCGTCTTAAGTGCATTTTTGACAAATTTGATAAGTGACGGATTTGCGTTTTCGTGTGGTGTTTTATATTCTGAATTGTTGGTTGTTTTTGATGAAAGCAAAAGTATTACATCATGGATACCGTCCCTGTTTTTTGGAGTTCCGATGATCGCAGGACCATTAGCTGGAGCACTTGCGACAAAATATGGCTGTCGGAAAGTTCTCATCTTTGGTGGAATTTTAACTAGTGTTGGTGTTTTTGCTAGTGCTTTTGCTACATCAATAGGCCAATTGTGTTTTTTATTTGGAATAGTAGCTGGAACCGGATTATCCATGGGATACGTAACATCGGTGGTCATGGTCGCATTTTATTTTGAGAAAAAGAGAGCCCTAACAACTGGGCTATCTGTGTGTGGTTCAGGAATTGGAACCTTTTTGTTTGCACCGTTGTTTGAATACTTAATAGAAGAATACACATGGAGAGGATCTTTGATTATACTAAGTGGTGTTACATTAAATTTAGTCGTTTGTGGTGCATTGTTACGACCATTAGAATTTACTCCTGCCGAAGAATGGAAAAGGAATCTAGAAACATTTGAAAAGATATCCAGGACGGTGTCAAAGGCGAGTCTTCATGATCATGGTCGTCATAGTCAGAAATGTAGTGAATCTGAAAGTTCTGAAGAAAATTCAAACGGAGAAGAAATCTGTGGTGCAGAACAGTTGAGTCACTCACAAGTCATTCTTCCCACTTTTCTTAATGAAAAGAAGAAGCAAATTCCCAAAGAAATTTTTGACGAAATGTGTAAAAATAGCAACCAAGCTTCCACTATATTGAAGAATTACCTTCACAACAGGCAGTCATCTGAAATAAACATCACAGAAAATCCCATTGAAAATAAGTTAATGGTAACGAGCAGCGACAATATTGTTTATGTCAAAGAAACAGCGACAAAGAAacgaaaaacacaaaacaaaaacagaacgACACAACAAAGGGCAAAAGTTCCTCAATATGTTCCATTGTATAGAAAAGATCTATTCTATCGTGGAAATATCATGAAATTTTCTGATATTTACCGTAGATCAACGAGTTGTCCTGAACTTTATCATGGATCCTTCGATGACGACAGCTCAGATGACGAAGACTATTTATGTCCCATTCCAAAACTACTCAGATTTTCAAAGCACATGAAGAAATTCTTTCGAACCATGTTTGATCCTACGATAATAAGAAGCCCTCTCTTTTTGGTGTTTGCCCTATCCAATTTTCTGCTGTATTTTTGGTATGACGTGCCATATGTATTTTCAGTCGACCAAGCAAAGGAGTTGGGAATTTCCGACAGAAAAGCTTCATTTTTATTGTCAGTGATTGGAATAGTAAATACGATTGGACAGATTATTTATGGATATATAGGAGACAAGAACATCAATCTTTCTCTCATTTATGGACTGTCTATCAGTACGGCAGGACTTGCAATAATGTTTTACCCTGTTTTTACTAGTTATACCATGATGGCTGTTTTATGTGGAACTTATGGCTTTTTCATCAGCGCAAATTATGTGTTTTCCACATTGATTTTGGTAGAATATCTTGGTATGGACAAACTGACTAATGCCTACGGTTTGATGATGCTGATACAAGGAATTGCCAATATGCTTGGACCACCATTTGCAGGTATGATGTCTAAAAGGAGTATGTATGATAAATCATTATTTGACCTCCACACATTATTAGATACATACTATTTAGTAGCTATAAGGAGTACGTATGTATGA

Transcript

ENSWXWP00000033828

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00929	RNase_T	Exonuclease	Family	Interproscan
PF06839	zf-GRF	GRF zinc finger	Domain	Interproscan
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010666	Domain	Zinc finger, GRF-type	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR047201	Domain	ERI-1-like, DEDDh 3'-5' exonuclease domain	Interproscan
IPR050327	Family	Proton-linked Monocarboxylate Transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11360	MONOCARBOXYLATE TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008028	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-