Detailed information of ENSWXWP00000019734.1 in Bathymodiolus septemdierum Gene info
Gene IDAnnotationChromosomeStartEndStrand
ENSWXWP00000019734.1E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED2131478078131522412-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyE3|E3 activity RING|PHD
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF02182SAD_SRASAD/SRA domainDomainInterproscan
PF12148TTDTandem tudor domain within UHRF1DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000626DomainUbiquitin-like domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003105DomainSRA-YDGInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR019956DomainUbiquitin domainInterproscan
IPR021991DomainUHRF1, tandem tudor domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR036987Homologous_superfamilySRA-YDG superfamilyInterproscan
IPR045134FamilyUHRF1/2-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14140E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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