Gene detail

Detailed information of ENSWXWP00000001308.1 in Bathymodiolus septemdierum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSWXWP00000001308.1	RESPIRATORY NITRATE REDUCTASE	1	131893411	131916464	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSWXWP00000001308

ATGGAGAATATGAAGGATCTAATGGCCGAATATTCTACGCGACTTAATTGTCAACCACTGTCTGATTTCGTCTTAGATTTGGATAAGTTTAAAGGAGATTTCATATCTCTTAGAGATGCATATAAGAAATAtgaatcattgtttgtgtttttgaaCAAATGTCTTAAGGATCTACGTACATCAGGAGATGAACTAAATAACTTAATTGCAAAACGATTTCGTGAAGAGGATCTAACAACATGGATGGATTCACATGATAAATTTGAAGAAgAAAAGCTTCAGTTACGAGAAGAACGTATCGCTGTAGATCGATCTGCATTAGCTAAAGCATCGGAGGCTAGGTCATCAGTAGCTAGAGCAGCTGTATCAGTAGCCGAAACTAACCAGTTAGCTAATGAAGCTGAAGTCGAAGCAGCCGAAGCCGAAAGTTTAGCCAAGAGGGCTTGGGAATCAGCAGAACTGGCATTGAAAGCAACAGAGGAAGCACGAAAGGCTGCGGTTGAAAAACGAAAGGCAGAGGATGAAGCCAGAAAACGAGCTCAGGAAAGAGCACAGAAGAAAGCAGAAGAAGAAAGGAAACAGAGAGAAGAAGAGAACAAGCTCTTAGTGGAAGAAGCTAAGAAGAAAGGCACTACATTTCAAGATGAACGTAAACGTGCAGACGAGGAGAAAGCTAAACAAGAAGCAGATCGATTAAATCCGAATAACTGGCCTAGATACATATACAGCGTTGAACCTGGAGACTATGATCCTGGTGTTGGGTGTATTGTTCGGTCACTAAAGGGTTCTATAAGTCGAGAAGATATAGAGGTAAAACGACTTGATCAAGTGACAGGAATATTAGAGCTAGCTGAGACAGAAGAGCTTGTTAGTAACATTATAGAGATCAAGCCGGTTGACAGTGAAAAGAAATTTTCATTTGAAGTGCCGATGTCTATATCATTTCCACACTGTACACCACGAGGATTGCCAGGAAAGGAACCTATTATCAAACATCTACAACCAAATGGTAAATGGATGGACTTACCTTCTTCAGAAGTTGCTTTCGATGATATAAAAGAGTTAAGATTTATTGAAACAAAAACAAGGAAGTTTGGACTGTTCGCTGTAGTGTTGAAGTTGAAGCGAGATACACTGACCTTTACAAAGAAAGGAAACAAAGTCTTCTCAACAGTAGATCCCAGAGTTACATTTACATGCAAACCTTCCATGTTTAAGATAAACACAAATTTCAATATTGAGgTCCAACCAGTAGAATTGTCAGCAGTAACGGAATTGAAACAAAGGAATCCAACCGTGTGCGCTGATCTTTTAGCTGCAAGTCCCATACTAAAGTTTTCTATCTTAAACAGAAAGTTTGCAAAGCCTTTACTACTGACCATGCCACTTCCACCaaataccagtaaaccaaagcgACCACAAACGGCAGCTGCAGGAAATAGAAGTAATCAGGAAGGACAAGAGATAAAACCACTAACAGCACGTCCATCTTCAGCTTTCCCATCCTCAAATCCAGATGAGGACTCAGATGAAGAGATACATTTACTAGTACGAGGTAGCATGGAACAGACCTGGACAAAAGTATCAAATGTTAAACTGTTTCAggccagaaataaagatatagttTCATTTGAAATTAAAGAACCAAAAGATAGATTCTTAATATTGAGGACAAAAGATGGAATGCCATGTGTACACGTTGAGAGAATCGCATTTTTGCTCGAAAACTCCATAATGTACCGAACAATACAAGTATTCCTACGCCAAAAGACTTATGACCCTAGGGAAATAATTGTATCTTGCGCACATTCAAATAGAGCAGAACGTGCTATTCGGAAATTTGAAGAAATTGGTTATGAAGAAGGACCAAGCCCGAGTAAAGATATATTAGTTAGAGAAGGACAAGTGCTCGAATTGAGTTTTAGAGGAAATATACAATGCCAGGAAAACAGTGGAAATTTAAAGCTTTTATTCAACACGCACATTCGGAGTAGATTGGATTTTAGTGTGGAAGAAATAGAAAAATTCGCTCAAAAAAGTTTCCATACGTATCGTGGGTTCCTACAAATATATTCAGAGATAACAAACAGGAATTTACATCAATCTGATCACCAGACACCAGGTGCACCAAAGAAACCACCTCTAGTGGAAATTCAAAGAGAGAGACAGCTACTGTCGGAACTTTTGATAAATATTCCCAAACCTGAACAAGAACCACCAAAGCCCCTTCTGACAGCACCGATTAAAATACATGTTGAAGCGCCGGATACCAAAGATGTGCTGGAATATGTTGCAACTGAACTTGGTGATGAATGGAAAATGTTAGCTCAGCTACTGAATCTTAAAAGTGTCCGAATTCAAGCTATACTTCGGCAAAACACAGCAAATCCTGATCCTAAAAAGATACGTTACGACATGCTAGTGTCTTGGGCGAAGAGAATACCCAGAAGTGCAAACAAGTTAGATTTATTAGCAACCGCATTAATGTCTTGTGGTAGAGGTGACATTGCTTCAGAACTACGTGATAAGGATTTAGAATACAAAAGGAATATGACCAAGGCACACAAAGACACGCATCTAAGAAGGGCATTCATAAAAGTGGCACAAAACCCAACTGCTGTCAGAAGCTGGATGGCAATCGCTAGACGGCTTGGTGTCTCAGAGGAGgaattaaaaaatattgacgAGAGTAAGCCTTCCGTACAAGAAAAGTGCTTCCACAGTTTACGTATGTGGCAGTCTGTAGCAGGGGAACAAGCCACTATACATATGCTGACAGATAGACTTAGGAAATGTAGATACAGGCAATTAGCAAGGGAGATAGAAACCATTGGTTGA

Transcript

ENSWXWP00000001308

CGGAATTAGAGGTTAAAATTCAAGATCTCATGGAGAATATGAAGGATCTAATGGCCGAATATTCTACGCGACTTAATTGTCAACCACTGTCTGATTTCGTCTTAGATTTGGATAAGTTTAAAGGAGATTTCATATCTCTTAGAGATGCATATAAGAAATAtgaatcattgtttgtgtttttgaaCAAATGTCTTAAGGATCTACGTACATCAGGAGATGAACTAAATAACTTAATTGCAAAACGATTTCGTGAAGAGGATCTAACAACATGGATGGATTCACATGATAAATTTGAAGAAgAAAAGCTTCAGTTACGAGAAGAACGTATCGCTGTAGATCGATCTGCATTAGCTAAAGCATCGGAGGCTAGGTCATCAGTAGCTAGAGCAGCTGTATCAGTAGCCGAAACTAACCAGTTAGCTAATGAAGCTGAAGTCGAAGCAGCCGAAGCCGAAAGTTTAGCCAAGAGGGCTTGGGAATCAGCAGAACTGGCATTGAAAGCAACAGAGGAAGCACGAAAGGCTGCGGTTGAAAAACGAAAGGCAGAGGATGAAGCCAGAAAACGAGCTCAGGAAAGAGCACAGAAGAAAGCAGAAGAAGAAAGGAAACAGAGAGAAGAAGAGAACAAGCTCTTAGTGGAAGAAGCTAAGAAGAAAGGCACTACATTTCAAGATGAACGTAAACGTGCAGACGAGGAGAAAGCTAAACAAGAAGCAGATCGATTAAATCCGAATAACTGGCCTAGATACATATACAGCGTTGAACCTGGAGACTATGATCCTGGTGTTGGGTGTATTGTTCGGTCACTAAAGGGTTCTATAAGTCGAGAAGATATAGAGGTAAAACGACTTGATCAAGTGACAGGAATATTAGAGCTAGCTGAGACAGAAGAGCTTGTTAGTAACATTATAGAGATCAAGCCGGTTGACAGTGAAAAGAAATTTTCATTTGAAGTGCCGATGTCTATATCATTTCCACACTGTACACCACGAGGATTGCCAGGAAAGGAACCTATTATCAAACATCTACAACCAAATGGTAAATGGATGGACTTACCTTCTTCAGAAGTTGCTTTCGATGATATAAAAGAGTTAAGATTTATTGAAACAAAAACAAGGAAGTTTGGACTGTTCGCTGTAGTGTTGAAGTTGAAGCGAGATACACTGACCTTTACAAAGAAAGGAAACAAAGTCTTCTCAACAGTAGATCCCAGAGTTACATTTACATGCAAACCTTCCATGTTTAAGATAAACACAAATTTCAATATTGAGgTCCAACCAGTAGAATTGTCAGCAGTAACGGAATTGAAACAAAGGAATCCAACCGTGTGCGCTGATCTTTTAGCTGCAAGTCCCATACTAAAGTTTTCTATCTTAAACAGAAAGTTTGCAAAGCCTTTACTACTGACCATGCCACTTCCACCaaataccagtaaaccaaagcgACCACAAACGGCAGCTGCAGGAAATAGAAGTAATCAGGAAGGACAAGAGATAAAACCACTAACAGCACGTCCATCTTCAGCTTTCCCATCCTCAAATCCAGATGAGGACTCAGATGAAGAGATACATTTACTAGTACGAGGTAGCATGGAACAGACCTGGACAAAAGTATCAAATGTTAAACTGTTTCAggccagaaataaagatatagttTCATTTGAAATTAAAGAACCAAAAGATAGATTCTTAATATTGAGGACAAAAGATGGAATGCCATGTGTACACGTTGAGAGAATCGCATTTTTGCTCGAAAACTCCATAATGTACCGAACAATACAAGTATTCCTACGCCAAAAGACTTATGACCCTAGGGAAATAATTGTATCTTGCGCACATTCAAATAGAGCAGAACGTGCTATTCGGAAATTTGAAGAAATTGGTTATGAAGAAGGACCAAGCCCGAGTAAAGATATATTAGTTAGAGAAGGACAAGTGCTCGAATTGAGTTTTAGAGGAAATATACAATGCCAGGAAAACAGTGGAAATTTAAAGCTTTTATTCAACACGCACATTCGGAGTAGATTGGATTTTAGTGTGGAAGAAATAGAAAAATTCGCTCAAAAAAGTTTCCATACGTATCGTGGGTTCCTACAAATATATTCAGAGATAACAAACAGGAATTTACATCAATCTGATCACCAGACACCAGGTGCACCAAAGAAACCACCTCTAGTGGAAATTCAAAGAGAGAGACAGCTACTGTCGGAACTTTTGATAAATATTCCCAAACCTGAACAAGAACCACCAAAGCCCCTTCTGACAGCACCGATTAAAATACATGTTGAAGCGCCGGATACCAAAGATGTGCTGGAATATGTTGCAACTGAACTTGGTGATGAATGGAAAATGTTAGCTCAGCTACTGAATCTTAAAAGTGTCCGAATTCAAGCTATACTTCGGCAAAACACAGCAAATCCTGATCCTAAAAAGATACGTTACGACATGCTAGTGTCTTGGGCGAAGAGAATACCCAGAAGTGCAAACAAGTTAGATTTATTAGCAACCGCATTAATGTCTTGTGGTAGAGGTGACATTGCTTCAGAACTACGTGATAAGGATTTAGAATACAAAAGGAATATGACCAAGGCACACAAAGACACGCATCTAAGAAGGGCATTCATAAAAGTGGCACAAAACCCAACTGCTGTCAGAAGCTGGATGGCAATCGCTAGACGGCTTGGTGTCTCAGAGGAGgaattaaaaaatattgacgAGAGTAAGCCTTCCGTACAAGAAAAGTGCTTCCACAGTTTACGTATGTGGCAGTCTGTAGCAGGGGAACAAGCCACTATACATATGCTGACAGATAGACTTAGGAAATGTAGATACAGGCAATTAGCAAGGGAGATAGAAACCATTGGTTGATAGAAGATAATAAAACGCATTTTACCAATAGCTGTGATATATGTCTAGTGTAAAGAGTGTCCTTGCCAATTAATCTATTTAAAGCATTTAATGAGTAGTTTTTGACGACTTTTTCTAATTTCTATTGAAATTTATAATATATCTTATATATATACTTGTTCCTCTTGTTTGAACAAGCATGCTTTAAAACTTAGCTCTTAGTTGCCGCAATATTCATTTAATTTATAGATTCTGTTATCAAAGCACATTTCTGTGATATTTAGCAATAAAAAGTGTATTGAACTTTATTAtcagtttgattgattgattgattggtatttaacgccaactttagcagtacctcagctatatcgtggcgttattAGAAGTGTGACTTCCTTGTAGTAATGGTATACGATGACACATACTTGTTATGTATAGCCTTCATTGGAGCAGAAAGGTGAACAGTATTGGCAGTAAATTTAATTAAGTAACAag

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00384	Molybdopterin	Molybdopterin oxidoreductase	Family	Interproscan
PF10588	NADH-G_4Fe-4S_3	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region	Domain	Interproscan
PF13510	Fer2_4	2Fe-2S iron-sulfur cluster binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000283	Conserved_site	NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site	Interproscan
IPR001041	Domain	2Fe-2S ferredoxin-type iron-sulfur binding domain	Interproscan
IPR006656	Domain	Molybdopterin oxidoreductase	Interproscan
IPR006963	Domain	Molybdopterin oxidoreductase, 4Fe-4S domain	Interproscan
IPR010228	Family	NADH:ubiquinone oxidoreductase, subunit G	Interproscan
IPR019574	Domain	NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding	Interproscan
IPR036010	Homologous_superfamily	2Fe-2S ferredoxin-like superfamily	Interproscan
IPR050123	Family	Prokaryotic molybdopterin-containing oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43105	RESPIRATORY NITRATE REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003954	Molecular Function	NADH dehydrogenase activity	Interproscan
GO:0008137	Molecular Function	NADH dehydrogenase (ubiquinone) activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016651	Molecular Function	oxidoreductase activity, acting on NAD(P)H	Interproscan
GO:0042773	Biological Process	ATP synthesis coupled electron transport	Interproscan
GO:0045272	Cellular Component	obsolete plasma membrane respiratory chain complex I	Interproscan
GO:0045333	Biological Process	cellular respiration	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-