Gene detail

Detailed information of ENSWXWP00000000642.1 in Bathymodiolus septemdierum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSWXWP00000000642.1	SHORT-CHAIN DEHYDROGENASE/REDUCTASE	10	48093660	48112770	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

ENSWXWP00000000642

GGGAGGTCACTCTATAATTTTTTTGGTGGAAAGAACTTTGAACGACCTGGGTTTATGGAATAAAAGGAATGCAAGTTTAATATCTAGAACGTACAATCACAATGGCATCCAGGCAGCTACCGTCCACATTTAAGAAACTAGTTGTGACTAAAATAAGTCAAAAGTTTCGTGACGTGGTCAGTCTAACACAAGAAAAGTTGCCAAATCCTGGAATTGGGGAGGTTCTTGTGAAAAACAGATTTGTGGGAATAAATGCATCTGATATTAATTACTCGGCAGGACGATATGACCCAACTGTTAAACCTCCATTTGACTGTGGATTTGAGggtGTAGGAGAAGTAGCAGCTGTAGGCCCTGGGGCCTCAGTTACAGTCGGACAGCCTGTGACCTACTCTATGCATGGAGCTTTCAGTGAATACAAAAGTGTTCCAGAAAAACTGCTGATAAGGCTGCCAAGGGTGTCCGCTGATTTTCTTCCATTACAAGTTAGTGGAGCTACTGCAGCTCTAGCTTTAGACAAGatgGGAGATTTAAAGTCCGGTGAAACAGTTCTAGTAACAGCTGCTGCAGGAGGCACTGGACAGTTTGCTgtACAATGGGCAAAGAGAGCTGGATGTCATGTGATTGGTACTTGTTCTACAGATGATAAAGTAGAATTCTTAAAaAAAATTGGTTGTGATAGACCTGTTAATTATAAGAAAGAAAATTTAAAAGAGGTACTTAGGGCAGAATATAAGAATGGTGTAGATGTTGTTTATGAATCGATTGGAGGGGAAATGTTTGAAGTTTGTTTGAATGcattGAGTGTCAAAGGTCGATTGATAATTATTGGATACATAACAGACTATAAATCTGATCTTGGATTTAAACCATCACGGACGTTAGCAACTATACCAGTCAGGTTACTGACCAAGTCAGCAAGCATTAAAGGATTTTTCTTGAACCACTTCGCAAAAGACTGGAAGCCATATGTGGCCAAAATGGCCGACATGATTGAGAAAGGGGAAATGCAGAGTTTTGTTGATATGGGAGAGAGTTGTCCACAGGGACCTTTCGTTGGTGTAGAAAAAATTGTTGATGCTGTCGAGTATCTGTATTCACAGAAGAGCATAGGAAAAATAGTTGTTGAATTAAATAAACCAGGAAGCAGTAAATTGTGACAGGATATGGCTTGAAGGCAACGACTACAAAGACAAGATTGTATCTGTTCCAAGAACATATACCCAAGAAACAAAATATAGtaacgccacaatatagctgaaatattgctaaaattggTGTTAAGCACtaatctatcaatcaatcaaacaaaataTAGTAGTCTATCAGTAGAAAATAATGACAAAACAACAATCAGGGGCAGATAATTCAATGTCTAAACTGTGTTTCTAGATATGACATAATTATTGCCAAAGTTGGCATAATACACAAATTAATTAGCTAGTTTTGTTGTAAATCATCAAATTATCATTAATTTACAATTGATTTTAACTCAGAGGTTGAAGAatagatattattatattttaatctatatgatagattttgattggattaaattagtcatgtgataataaaataattgagataTTTTGCCAAAATTTGCACTGCCGGGAAACAACTATTGTTCCCtgccgaacaacccaattttcccccacaagggagataacctataaaacattggcaaaaatataataaaacaattacggccctctgtgtagggaaacatccagatttgtcaaccctcAGGGTGGGGGGGGTTTCCCctcaggttgacaaatctggatgtttccctacacagagggccataattgtatattgaaaataaaactgaATGAAGTGTCCATAATTCATCTTCAAATTTAAGCCACAACAGTAGTGTATTGATTAGAGTGATTGCCTATAGTACTGTAGATTGTAGGTTGGagtcaagtcaaaccaaagactataatattggtatttgctgtatttctgctaagcatgcaccattaaaCAGTAACAGTACAGACTGGTTGCTTCATAATGAGGATAATGTTTAAGAATGATCCGACATGTTTAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF08240	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002364	Conserved_site	Quinone oxidoreductase/zeta-crystallin, conserved site	Interproscan
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR013149	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR013154	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR020843	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR051397	Family	Zinc-containing alcohol dehydrogenase-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43677	SHORT-CHAIN DEHYDROGENASE/REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0036132	Molecular Function	obsolete 13-prostaglandin reductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-