Gene detail

Detailed information of ENSWXWP00000000331.1 in Bathymodiolus septemdierum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSWXWP00000000331.1	ATP-CITRATE SYNTHASE	1	49962731	50020159	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSWXWP00000000331

ATGTCTGCCAAAGCGATAAGTGAGGCCAAAGGGAAGGAGCTGCTGAACAAAAATGTAAATGGAGCGATGAAGAACAAGTTTGCTATAGTTACAGAAGGCACAGATATTGACTCCTTGTGTTTGGAACATTCTTGGTTAAAGTCAGAGaAACTTGTGTGTAAACCAGATCAGCTGATAAAGCGAAGAGGAAAACTTGGTCTTATAAAAGCAGGAGCTGATATCAACGGTATAAAAGAATGGCTTGGTAATAAACTGGGCAAAGAGTTTCATgttGGGGCATCAAAAGGAAAACTGAAGAATTTTATCATAGAGCCGTTTGTAAAGCATGAACAGaatgaaGAATTTTATGTGTGTATCTATTCTCATCGTAGTGCTGACACCATTTTGTTTCATCATGAAGGTGGAATAGACATTGGTGATGTTGATGCAAAGGTAATTCAATTAATAGGACAAGATCAAGTTAGGATTAACCCACTTGTGTTCACAGGGGGAAATATCTACATTTTAGACTTGGCAGCAAAAATAGACCAATGTGCCGAGTTTATGTGTAAATCTAAATGGGGAGAAATAGAATTCCCTCCTCCGTTTGGTAGAGAAGCACTTCCTGAGGAGGCATATATAGCAGAATTAGATGCTAAGAGTGGAGCATCTCTAAAACTAACAATCCTCAACAAGAAGGGAAGAATATGGACAATGGTGGCTGGGGGTGGAGCTTCTGTTATATATGCTGATACTATTTGTGATTTGGGTGGTGCATCAGAATTGGCAAACTATGGTGAATACTCTGGTGCTCCCAGTGAACAACAAACATACGAGTATGCTAAAACTTTAATGGGTTTGATGACAGAGGAAGTACATCCAGATGGTAAAATATTAATAATAGGTGGAGGTATAGCTAACTTTACCAATGTGGCTTCTACATTTAAGGGAATTGTCCGAGCTTTAAGAGAATTCCAGCAGAAGTTGATAGAAGGAAGCGTGTCTATCTACGTCAGGAGAGCTGGACCAAATTATCAAGAAGGGTTGCGAATTATGAGAGAGTTAGGCAATACATTAGGAGTACCTATCCATGTTTTTGGACCAGAGACACACATGACATCAATTGTCAGCATGGCGTTAGGAAAGACAGAAATTCCACACTCTCCGAAACCAATGCATACGACAGCAAACTTCCTGCTTCCTACTGGAGGGGTTATCAaccctactttaTCTCCCTCGTCAAGTAGACGAGAATCGGTAAATGACGATAAATCAGCTCCTAAAAATAGTACAGTCAACCAGAAGACAGCTGACAACCAGACGGATGTCCAGACAATAGCTAGAACATTATTTACTAACAAAACTAAGTGTATAATATGGGGCATGCAGCAGAGAGCAGTACAGGGAATGATGGACTTTGATTATGTTTGTTCTAGAAAAGATCCGTCAGTCGTGGCCATGATATATCCATTTACGTATGTATTACATAGATTGAGCATGGATGATGCTATGACTAAACATTCTGGTGCTGACATTCTTATTAGCTTTGCTTCATTGAGATCAGCTTATGAGAGTACAGTAGAAACAATGAATTACCCTCAGataaGAACCATAGCTATAATTGCTGAAGGTATACCAGAGAATTTAACTAGACAGTTGATTAAAACAGCTGATGAGAAAGGTGTGGCCATAATAGGCCCAGCTACAGTTGGAGGTGTGAAGCCAGGATGTTTTAAGATAGGTAATACTGGTGGAATGTTAGACAACATATTAGCTTCTAAGTTGTACAGACCAGGCAGtgtggCCTATGTATCAAGGTCAGGTGGAATGTCAAATGAATTAAACAATATAATTTCTCTTAACACTAATGGTGTGTTTGAAGGAGTGGCTATAGGAGGTGACAGGTATCCAGGTACTGTATTTTTGGACCATATCATGAGATACCAGAACGAAAAAGATGTCAAAATGATTGTTGTACTTGGTGAGGTTGGAGGCACAGAAGAATATAGAATCATAAACGCCATTAAAGATGGCCGCATTACTAAGCCAATTGTAGCATGGTGTATAGGAACATGTGCTAAAATGTTTACATCAGAAGTACAGTTTGGTCACGCTGGAGCATGTGCTAATGCCGAGGCTGAGACAGCCGGGGAGAAGAACAAGGCTCTGACAGAAGCAGGATGCTTTGTTCCTGCTAGTTTTGATGAATTAGGTCACATGATTTCAGATGTCTATAAAAAGTTGGTAAAAGATGGTGTCATAGTTCCAGAGGAAGAGGTTCCTCCTCCAACTGTACCTATGGATTACACTTGGGCAAGGGAGTTAGGACTAATCCGAAAACCAGCATCATTTATGACAAGTATATGTGATGAGCGTGGAAAAGAACTGTTGTATGCTGGGATACCTATCACGGACATATTTAAAGAAGATATGGGAATTGGAGGAGTACTGAGTCTCTTATGGTTCCAGAGAAGGCTTCCACGTTACGCTACAAAGTTTATAGAAATGTGTTTGATGGTGACAGCTGATCATGGCCCCGCTGTATCTGGTGCCCATAACACCATTGTATGTGCTCGAGCTGGTAAAGATCTGGTATCCAGTCTGGCTTCAGGATTATTGACAATTGGTGACAGATTTGGAGGTGCTTTAGATGCTGCAGCCAAACAGTTTAGTGATGCCTACGATAGTAAACGGATCCCTATGGAGTTTGTCAATCAAATGAGGAAGGAGGGGAAACTGATCATGGGAATAGGACACAGAGTTAAATCTATAAACAATCCTGATATGAGAGTAGTTATATTAAGAGATTACGCCCAGAAGAACTTTCCCTCTACTCCACTTTTAGATTATGCCAGTGAAGTAGAAAAAATTACTACATCAAAGAAACCCAATTTAATATTAAATGTAGATGGGTTTATTGGAGTAACGTTTGTAGATTTACTCAATAATTGTGGTTGTTTTACAAGagaagaagctaaAGACCTTGTAGATATTGGTGCTCTTAATGGGTTGTTTGTACTAGGTAGAAGTATGGGATTTATAGgacaTTTTCTAGACCAGAAGAGATTAAAACAAGGTTTATACAGACATCCATGGGACGACATTTCATATATTATGCCAGAGACTACAGGACTTATGGGGGCAGAGACAGACAAGATACAATAA

Transcript

ENSWXWP00000000331

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00285	Citrate_synt	Citrate synthase, C-terminal domain	Domain	Interproscan
PF00549	Ligase_CoA	CoA-ligase	Domain	Interproscan
PF16114	Citrate_bind	ATP citrate lyase citrate-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002020	Family	Citrate synthase	Interproscan
IPR005811	Domain	ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain	Interproscan
IPR014608	Family	ATP-citrate synthase	Interproscan
IPR016102	Homologous_superfamily	Succinyl-CoA synthetase-like	Interproscan
IPR016143	Homologous_superfamily	Citrate synthase-like, small alpha subdomain	Interproscan
IPR017440	Active_site	ATP-citrate lyase/succinyl-CoA ligase, active site	Interproscan
IPR017866	Conserved_site	Succinyl-CoA synthetase, beta subunit, conserved site	Interproscan
IPR032263	Domain	ATP-citrate synthase, citrate-binding domain	Interproscan
IPR033847	Conserved_site	ATP-citrate lyase/succinyl-CoA ligase, conserved site	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036969	Homologous_superfamily	Citrate synthase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23118	ATP-CITRATE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003878	Molecular Function	ATP citrate synthase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006085	Biological Process	acetyl-CoA biosynthetic process	Interproscan
GO:0006101	Biological Process	citrate metabolic process	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0046912	Molecular Function	acyltransferase activity, acyl groups converted into alkyl on transfer	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-