Gene detail

Detailed information of ENSTGOP00000008221.1 in Osedax fenrisi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSTGOP00000008221.1	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	chr1	94583782	94584606	+

Gene Structure

More details in Jbrowse Sequence

CDS

ENSTGOT00000009543.1

ATGCCGAGATGTGATGTAATACCTGTATTAGGCAATAAGGACGCGGAGAAATGTTCCGGTAATGTGACATTCTCTAACGGCCCGGGATTGGTTAAGATTCCAACGTTTCAAAACGATCATGATAACAAGTTCCACTTCAGTTTCCGGAAGTTATGGGCATTCACGGGTCCTGGTTTAATCATGAGTGTCGCCTACATTCACCCCGGGAACATCGAGTCTGACATTCAAACCGGTTCCATGGCTAAGTACAAGCTTCTCTGGGTGCTGATGTGGTCTACACTGATGGGTTTAGTGTTGCAGTTGTTATCCGTGAAGCTGAGCACGGTTACAGGACTAAACTTAGCGGAACTCTGTGCTAGGGAATACCCGAAATGTCCGAGATACATTCTATGGTTATTGGTAGAGGTGGCTATCATTGGTAGTGATATTCAAGGGGTGCTCGGTTCCGCTCTAGCTATCAACATCCTGTCAAACGGAACAATACCGATATGGGTGGCGACCTTGATAACCCTAGCGGACACCTTCACATTCCTGTTCCTAGAGAACTTCGGCATACAAAAACTTGAAGTATTATTCCGTATTTTGATCGCTACTATTGGATCATGTTTCTTCTATATCTACATCACGGTGCTGCCGGATCAGGTATCCATCCTGCGAGGCCTGGCGACCCCGTGGTGCCACGACTGCTCCGATCTAGCCGTCCTACAGCTGATAGGCATAGTGGGGGCCGTGGTCATGCCCCATAACATGTATCTGCACAGCGCCCTGGTTCTGTCGCGTAATATCGATAGGAAGAACAAGAACAGACTGAAGGAGGCACACGTCTACTATGGTATCGAATCAGGTGTCGCGTTAACGGCAACTTTAATCATCAACATCTTTGTCGTCGCAATATTTGCATCGGAATTCTCTGGAGATGAATTCATACGACCCAGTATAGGCAAAGCGGCGGAATGGATAGGAGATCATTACGGGCTCACCATGAAGATCGTATGGGCAGTAGGTATTCTGGTGGCGGGTCAAAGTTCAACCATGACGGGGACGTATGCTGGGCAATTCGTGATGAGCGGTTTTCTGAAAATCCACTGGTCGAAGTGGCGTCGAGTACTGGTCACTCGCTTCGTAGCGATGTTGCCCGCTGTTCTAGTGGCGCTGTACTCCAGTGACCTGTTGGGCGTCCTTCACCTGTGGCTGAACGTCCTTCAGATGGTACAACTTCCGTTCGCTTTGATTCCAGTCCTCCAGTTCACCAACAGTAAACGTATCATGGGCGACTTCGTTAACGGCAGTGCAATGAGATTATTGTCTTGGTTAATGGCATTGATGGTGATGTCTATTAATGTCTACATAGTGGTCAAACATCTGATTATAGATATCGAATCAACGCTACTGCATATCATAGTGATAGTGATGACGTTATTCTACATGGCTTTTATCATTTATCTGATGATCGGAGTACGCGCCTATAGAAGGATGAGGATATGGGTGTGGCTAAGAATGGAAGATGTGTTACCATTAGATGAAGATGATGATGAAGAAAAAGATGATGGTTTAAAAGATGAACCCGGAAGGCCCGAGAAGCCCCTACCTTCGGACTGTTGCGGATCAGGTTGTCAGCCCTGCGTTAAGGATATCTACAAAGAAGAACTGAAGATGTGGAGGAACGATTGCAGAGAGAGGATCGCGGGAGGGCAAACTAACGGAGCAATCGAACTAAGCGTACATGGCAAATCTCTCAACAATGATGTGTATTACAAGTTTAAAATAATCGGCAAAACAGCGGAGAATCACAATTGTTACCGTTTCAAGTTCTCGATGCCGGACAATACAGAACAATACAGATCTGGACATCACGTGATTCTCAGATGGAAGAATGTAAAATCAACTTTGACTAGACAATACACTTTAATCAATGATGCAGATGTATCCGAATTCTTTGAAGTAATCATAAAGATATACGATGATGGAAGAATGGGTCAGTACATTAAAACATGGAACTTAGGAGACTTCATAGAATGGAGGGGCCCTGTAGGACACTTTCATTATAAAGCTAATGAACAAAAGCACGTACTACTACTGGCATCTGGCACAGGTTTTGCTCCTATGATTCAGGTGATAAAGGAGATTCTGAACAACGAAAGAGATAGGACGGTGATAAGACTGCTGTACTCTAGTAGAAGTAGTGAAGACATTCTCTGCAAATATGACCTGGATAAGTGGAACGAGTTCGCCAAGTTCTCCATGCTCTATGTATTGTCTAATAGAAACGTACCCGACGAACTTAACAAGATGGAGATAACGGACATGATACACAGACGACGCGTGGACAAGCAACTGTTGTCGTCGGAACTCGACCGCATGGCGATACCGGACACGAGAGTGATGATCTGCGGGTCGAAGGTGTACAACAGGGCTATGGCGGATAACGTTAAACAGCTCGGAGTCGACGAGCGTCACGTGTTCATATTCTAG

Transcript

ENSTGOT00000009543

CTTGCGATGCCGAGATGTGATGTAATACCTGTATTAGGCAATAAGGACGCGGAGAAATGTTCCGGTAATGTGACATTCTCTAACGGCCCGGGATTGGTTAAGATTCCAACGTTTCAAAACGATCATGATAACAAGTTCCACTTCAGTTTCCGGAAGTTATGGGCATTCACGGGTCCTGGTTTAATCATGAGTGTCGCCTACATTCACCCCGGGAACATCGAGTCTGACATTCAAACCGGTTCCATGGCTAAGTACAAGCTTCTCTGGGTGCTGATGTGGTCTACACTGATGGGTTTAGTGTTGCAGTTGTTATCCGTGAAGCTGAGCACGGTTACAGGACTAAACTTAGCGGAACTCTGTGCTAGGGAATACCCGAAATGTCCGAGATACATTCTATGGTTATTGGTAGAGGTGGCTATCATTGGTAGTGATATTCAAGGGGTGCTCGGTTCCGCTCTAGCTATCAACATCCTGTCAAACGGAACAATACCGATATGGGTGGCGACCTTGATAACCCTAGCGGACACCTTCACATTCCTGTTCCTAGAGAACTTCGGCATACAAAAACTTGAAGTATTATTCCGTATTTTGATCGCTACTATTGGATCATGTTTCTTCTATATCTACATCACGGTGCTGCCGGATCAGGTATCCATCCTGCGAGGCCTGGCGACCCCGTGGTGCCACGACTGCTCCGATCTAGCCGTCCTACAGCTGATAGGCATAGTGGGGGCCGTGGTCATGCCCCATAACATGTATCTGCACAGCGCCCTGGTTCTGTCGCGTAATATCGATAGGAAGAACAAGAACAGACTGAAGGAGGCACACGTCTACTATGGTATCGAATCAGGTGTCGCGTTAACGGCAACTTTAATCATCAACATCTTTGTCGTCGCAATATTTGCATCGGAATTCTCTGGAGATGAATTCATACGACCCAGTATAGGCAAAGCGGCGGAATGGATAGGAGATCATTACGGGCTCACCATGAAGATCGTATGGGCAGTAGGTATTCTGGTGGCGGGTCAAAGTTCAACCATGACGGGGACGTATGCTGGGCAATTCGTGATGAGCGGTTTTCTGAAAATCCACTGGTCGAAGTGGCGTCGAGTACTGGTCACTCGCTTCGTAGCGATGTTGCCCGCTGTTCTAGTGGCGCTGTACTCCAGTGACCTGTTGGGCGTCCTTCACCTGTGGCTGAACGTCCTTCAGATGGTACAACTTCCGTTCGCTTTGATTCCAGTCCTCCAGTTCACCAACAGTAAACGTATCATGGGCGACTTCGTTAACGGCAGTGCAATGAGATTATTGTCTTGGTTAATGGCATTGATGGTGATGTCTATTAATGTCTACATAGTGGTCAAACATCTgATTATAGATATCGAATCAACGCTACTGCATATCATAGTGATAGTGATGACGTTATTCTACATGGCTTTTATCATTTATCTGATGATCGGAGTACGCGCCTATAGAAGGATGAGGATATGGGTGTGGCTAAGAATGGAAGATGTGTTACCATtagatgaagatgatgatgaagaaAAAGATGATGGTTTAAAAGATGAACCCGGAAGGCCCGAGAAGCCCCTACCTTCGGACTGTTGCGGATCAGGTTGTCAGCCCTGCGTTAAGGATATCTACAAAGAAGAACTGAAGATGTGGAGGAACGATTGCAGAGAGAGGATCGCGGGAGGGCAAACTAACGGAGCAATCGAACTAAGCGTACATGGCAAATCTCTCAACAATGATGTGTATTACAAGTTTAAAATAATCGGCAAAACAGCGGAGAATCACAATTGTTACCGTTTCAAGTTCTCGATGCCGGACAATACAGAACAATACAGATCTGGACATCACGTGATTCTCAGATGGAAGAATGTAAAATCAACTTTGACTAGACAATACACTTTAATCAATGATGCAGATGTATCCGAATTCTTTGAAGTAATCATAAAGATATACGATGATGGAAGAATGGGTCAGTACATTAAAACATGGAACTTAGGAGACTTCATAGAATGGAGGGGCCCTGTAGGACACTTTCATTATAAAGCTAATgaaCAAAAGCACGTACTACTACTGGCATCTGGCACAGGTTTTGCTCCTATGATTCAGGTGATAAAGGAGATTCTGAACAACGAAAGAGATAGGACGGTGATAAGACTGCTGTACTCTAGTAGAAGTAGTGAAGACATTCTCTGCAAATATGACCTGGATAAGTGGAACGAGTTCGCCAAGTTCTCCATGCTCTATGTATTGTCTAATAGAAACGTACCCGACGAACTTAACAAGATGGAGATAACGGACATGATACACAGACGACGCGTGGACAAGCAACTGTTGTCGTCGGAACTCGACCGCATGGCGATACCGGACACGAGAGTGATGATCTGCGGGTCGAAGGTGTACAACAGGGCTATGGCGGATAACGTTAAACAGCTCGGAGTCGACGAGCGTCACGTGTTCATATTCTAGCTGTACGTGTGTATGTGCATGCGTATACGCTTATAGGCTTGCTCGCGTTGATATATTTATTCTCTGGTAATATTGACATTAGTTTATGTGTATTTCAATTCCGGTGAACAAATAGCCAGATATAGAGATAGAGgcagaaagagagagagagataaggaGATCCTCGATTGCGTAGTAGAGAACTATTAATCAGTAAACAGAACTAGACATTAAATAGAATTTCATGAGTTTCAGACGCTTTCAATAATTCCGATTTTTATACGCATACGTTTGTACGCTGTACTATTTACAATGTACGTAGTgaattgtacagtgtataatgatACGTATACAGTACGTGGTGCAATTTTGTTGTATCAATCCCTGTTTTGGTTATTCAtttcgtattaatataatagttattaccTGTGATACGTACCTGTGATATGTGTTAACATGTAACCCTGTCATGTCACATCATGCATACAAGTATTACATGCATGTAGGACATATTCGATATACAATGATTCCTGTATAAGGGCATGGTATTGCATAGcggtatattatattgttctaGAAGACTTCAATTTCCCGATAATtgattaaattgtatatatttttatattttatagcaaAATTTGTAGTTTAGATTaagcatattttaatatttatttatttattcagaataatttgtctaatataaattgtattataaatatacatttaattgaatacatatattttatcaacc

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00175	NAD_binding_1	Oxidoreductase NAD-binding domain	Domain	Interproscan
PF00970	FAD_binding_6	Oxidoreductase FAD-binding domain	Domain	Interproscan
PF01566	Nramp	Natural resistance-associated macrophage protein-like	Family	Interproscan
PF09791	Oxidored-like	Oxidoreductase-like protein, N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001046	Family	NRAMP family	Interproscan
IPR001433	Domain	Oxidoreductase FAD/NAD(P)-binding	Interproscan
IPR008333	Domain	Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain	Interproscan
IPR017927	Domain	FAD-binding domain, ferredoxin reductase-type	Interproscan
IPR017938	Homologous_superfamily	Riboflavin synthase-like beta-barrel	Interproscan
IPR019180	Domain	Oxidoreductase-like, N-terminal	Interproscan
IPR039261	Homologous_superfamily	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11706	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005381	Molecular Function	iron ion transmembrane transporter activity	Interproscan
GO:0005384	Molecular Function	manganese ion transmembrane transporter activity	Interproscan
GO:0015086	Molecular Function	cadmium ion transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0030001	Biological Process	metal ion transport	Interproscan
GO:0046873	Molecular Function	metal ion transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-